LOC118936524 (hsp70b)


Basic Information

Item Value
gene id LOC118936524
gene name hsp70b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36818369 ~ 36828427 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940952.1
GGAGAGTTCGAGAAATGGCTAGAAATCATGAGTGCTATTTTTTAGGCAATGGGGGCGGTATATATTCTGGTGAAGTACATTCAGATTCAAACATCGACTCAACGAGAATACTAAAGGGAAAAGAAAGCAAGAAAAGAGAAGAGATACGTTCATTCTCTACATTCATAAACTGCAACTAACTCCAAACCATCAAGATGTCATCAGCTAAAGGCCCGTCTATCGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTGGAGATCATCGCCAACGACCAGGGCAGCAGGACCACACCCAGCTATGTGGCCTTCACAGACACTGAGAGACTTATCGGAGACGCAGCAAAGAACCAGGTGGCCATGAACCCCAACAACACCGTTTTCGACGCCAAACGCCTGATTGGCCGAAAGTTCAACGATCAGGTCGTGCAAGCCGACATGAAGCACTGGCCCTTCAAGGTGGTCAGCGACGGAGGAAAGCCTAAAGTTCAGGTCGATTACAAAGGTGAGAACAAATGCTTCAACCCAGAGGAGATCTCCTCCATGGTCCTGGTGAAGATGAGGGAGATCGCTGAGGCTTACCTGGGCCAGAAGGTGTCCAATGCAGTCATCACAGTCCCTGCCTACTTCAACGATTCACAGAGACAGGCCACTAAGGACGCTGGAGTGATCGCTGGGCTGAATGTGCTGAGGATCATCAATGAGCCCACGGCGGCAGCCATCGCCTATGGCATGGACAAAGGCATGTCCAGGGAACGCAACGTCCTTATTTTTGACCTGGGTGGGGGCACCTTTGACGTGTCCATCCTGACCATCGAGGATGGGATCTTTGAGGTGAAGGCCACAGCTGGAGACACTCACCTGGGCGGGGAGGACTTTGACAACCGCCTGGTCAGTCACTTTGTGGAGGAGTTCAAGAGGAAACACAAGAAGGACATCAGCCAGAACAAGCGGGCTCTGAGGAGGCTGAGGACAGCCTGCGAGAGGGCCAAGAGAACACTGTCCTCCAGCTCCCAGGCCAGCATTGAGATTGACTCTCTTTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGTTTTGAGGAAATGTGTTCCGACCTCTTCAGGGGAACCCTGGAGCCTGTGGAGAAAGCCCTCGGGGATGCCAAGATGGACAAGGCCCAAATTCACGACGTCGTCCTGGTCGGAGGCTCCACCCGGATCCCCAAGGTCCAGAAGCTCCTGCAGGACTTTTTCAACGGCCGAGAGCTAAACAAGAGCATCAACCCAGACGAGGCGGTGGCCTACGGCGCTGCCATCCAGGCGGCCATCTTGTCTGGCGACAAGTCTGAGAACGTCCAGGACCTGCTGCTGCTGGATGTGGCTCCCCTGTCCCTGGGCATCGAAACCGCCGGAGGGGTCATGACCGCCCTGATCAAACTCAACACCACCATCCCATCCAAACAGACCCAGACCTTCACCACTTACTCCGACAACCAGCCCGGGGTCATGATCCAGGTctacgagggagagagagccatgaccaaggacaacaacctcctggGGAAGTTTGAGCTCTCTGGGATCCACCCTGCCCCACGAGGAGTCCCTCAGATCGAGGTGACCTTTGACATCGACGCCAACGGCATTCTGAACGTATCAGCGGTGGACAAGAGCACGGGCAAAGAGAACAAGATCACCATCACCAACGACAAGGGCCGGCTCAGCAAAGAGGATATTGAGAGGATGGTGCAGGACGCTGACAAATACAAAGCTGAGGATGACGCACAGAGGGAGAAGATAGCTGCCAAGAACTCCCTGGAGTTGTACGCCTTCAATATGAAGAGCAGCGTGGAGGACGACAACATGAAAGGCAAGATCAGCCAGGAGGACAAAAAGAAAGTGGTGGACAGGTGCGACCAGACCATTTCCTGGTTGGAGAACAACCAGCTGGGCGACAAAGAGGAGTATGAGCATCAGCTAAAGGAGCTGGAGAAAGTATGCCAGCCTATCATTACCAAGCTGTACCAGCAGGGAGGGATGCCCACAGGTTGCTGTGGAGATCAGGCACGGACCAGCTCTGGTGACAGCTCCCAAGGCCCAACCATTGAAGAGATTGACTAAAGTGAGGGATTTTTATAAAGGACTTTTCAAAATGCATTAGTATCACTGCATACAATTTACTATTCAGGAAATACTTTGTACTTGTAAAAACACACTGTACATCTGTTGATTCATACCATATTGCATTGCTGGACattgcaaataaaatgtatttaaatatg
>XM_036940954.1
GGTGAAGTACATTCAGATTCAAACATCGACTCAACGAGAATACTAAAGGGAAAAGAAAGCAAGAAAAGAGAAGAGACACGTTCAACAGACCTCTACATTCATAAACTGCAACTAACTCCAAACCATCAAGATGTCATCAGCTAAAGGCCCGTCTATCGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTGGAGATCATCGCCAACGACCAGGGCAGCAGGACCACACCCAGCTATGTGGCCTTCACAGACACTGAGAGACTTATCGGAGACGCAGCAAAGAACCAGGTGGCCATGAACCCCAACAACACCGTTTTCGACGCCAAACGCCTGATTGGCCGAAAGTTCAACGATCAGGTCGTGCAAGCCGACATGAAGCACTGGCCCTTCAAGGTGGTCAGCGACGGAGGAAAGCCTAAAGTTCAGGTCGATTACAAAGGTGAGAACAAATGCTTCAACCCAGAGGAGATCTCCTCCATGGTCCTGGTGAAGATGAGGGAGATCGCTGAGGCTTACCTGGGCCAGAAGGTGTCCAATGCAGTCATCACAGTCCCTGCCTACTTCAACGATTCACAGAGACAGGCCACTAAGGACGCTGGAGTGATCGCTGGGCTGAATGTGCTGAGGATCATCAATGAGCCCACGGCGGCAGCCATCGCCTATGGCATGGACAAAGGCATGTCCAGGGAACGCAACGTCCTTATTTTTGACCTGGGTGGGGGCACCTTTGACGTGTCCATCCTGACCATCGAGGATGGGATCTTTGAGGTGAAGGCCACAGCTGGAGACACTCACCTGGGCGGGGAGGACTTTGACAACCGCCTGGTCAGTCACTTTGTGGAGGAGTTCAAGAGGAAACACAAGAAGGACATCAGCCAGAACAAGCGGGCTCTGAGGAGGCTGAGGACAGCCTGCGAGAGGGCCAAGAGAACACTGTCCTCCAGCTCCCAGGCCAGCATTGAGATTGACTCTCTTTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGTTTTGAGGAAATGTGTTCCGACCTCTTCAGGGGAACCCTGGAGCCTGTGGAGAAAGCCCTCGGGGATGCCAAGATGGACAAGGCCCAAATTCACGACGTCGTCCTGGTCGGAGGCTCCACCCGGATCCCCAAGGTCCAGAAGCTCCTGCAGGACTTTTTCAACGGCCGAGAGCTAAACAAGAGCATCAACCCAGACGAGGCGGTGGCCTACGGCGCTGCCATCCAGGCGGCCATCTTGTCTGGCGACAAGTCTGAGAACGTCCAGGACCTGCTGCTGCTGGATGTGGCTCCCCTGTCCCTGGGCATCGAAACCGCCGGAGGGGTCATGACCGCCCTGATCAAACTCAACACCACCATCCCATCCAAACAGACCCAGACCTTCACCACTTACTCCGACAACCAGCCCGGGGTCATGATCCAGGTctacgagggagagagagccatgaccaaggacaacaacctcctggGGAAGTTTGAGCTCTCTGGGATCCACCCTGCCCCACGAGGAGTCCCTCAGATCGAGGTGACCTTTGACATCGACGCCAACGGCATTCTGAACGTATCAGCGGTGGACAAGAGCACGGGCAAAGAGAACAAGATCACCATCACCAACGACAAGGGCCGGCTCAGCAAAGAGGATATTGAGAGGATGGTGCAGGACGCTGACAAATACAAAGCTGAGGATGACGCACAGAGGGAGAAGATAGCTGCCAAGAACTCCCTGGAGTTGTACGCCTTCAATATGAAGAGCAGCGTGGAGGACGACAACATGAAAGGCAAGATCAGCCAGGAGGACAAAAAGAAAGTGGTGGACAGGTGCGACCAGACCATTTCCTGGTTGGAGAACAACCAGCTGGGCGACAAAGAGGAGTATGAGCATCAGCTAAAGGAGCTGGAGAAAGTATGCCAGCCTATCATTACCAAGCTGTACCAGCAGGGAGGGATGCCCACAGGTTGCTGTGGAGATCAGGCACGGACCAGCTCTGGTGACAGCTCCCAAGGCCCAACCATTGAAGAGATTGACTAAAGTGAGGGATTTTTATAAAGGACTTTTCAAAATGCATTAGTATCACTGCATACAATTTACTATTCAGGAAATACTTTGTACTTGTAAAAACACACTGTACATCTGTTGATTCATACCATATTGCATTGCTGGACattgcaaataaaatgtatttaaatatg

Function

NR:

description
heat shock protein 70b

GO:

id name namespace
GO:0009408 response to heat biological_process
GO:0046686 response to cadmium ion biological_process
GO:0005524 ATP binding molecular_function

KEGG:

id description
K03283 HSPA1s; heat shock 70kDa protein 1/2/6/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940952.1 False 2290 mRNA 0.52 2 36818369 36821453
XM_036940954.1 True 2226 mRNA 0.53 2 36818369 36828427

Neighbor

gene id symbol gene type direction distance location
LOC118938278 hsp70b coding downstream 3764 36811495 ~ 36814605 (-)
LOC118938284 hsp70b coding downstream 9206 36805853 ~ 36809163 (-)
LOC118938283 hsp70b coding downstream 16365 36798804 ~ 36802004 (-)
LOC110486257 hsp70b coding downstream 23131 36791910 ~ 36795238 (-)
LOC118938279 hsp70b coding downstream 30319 36777934 ~ 36788050 (-)
LOC110486253 LOC106607285 coding upstream 12354 36840781 ~ 36852060 (-)
LOC110485161 LOC106607288 coding upstream 29003 36857430 ~ 37073395 (-)
LOC110485163 LOC106607291 coding upstream 287012 37115439 ~ 37120056 (-)
LOC110486259 kat2a coding upstream 292161 37120588 ~ 37133109 (-)
LOC110486260 LOC106601022 coding upstream 305392 37133819 ~ 37151534 (-)
G1171122 NA non-coding downstream 56352 36754229 ~ 36762017 (-)
LOC118938280 hsp70b non-coding downstream 57999 36750225 ~ 36760370 (-)
G1171116 LOC106601019 non-coding downstream 83794 36733256 ~ 36734575 (-)
G1171101 LOC106607274 non-coding downstream 161272 36652759 ~ 36657097 (-)
G1171056 NA non-coding downstream 207322 36610764 ~ 36611047 (-)
G1171132 NA non-coding upstream 2493 36830920 ~ 36831206 (-)
G1171133 NA non-coding upstream 2829 36831256 ~ 36831589 (-)
G1171068 NA non-coding upstream 27450 36855877 ~ 36856985 (-)
G1171139 NA non-coding upstream 39544 36867971 ~ 36868185 (-)
G1171051 NA other downstream 221728 36595832 ~ 36596641 (-)
G1171050 NA other downstream 223843 36594054 ~ 36594526 (-)
G1170998 NA other downstream 324845 36493089 ~ 36493524 (-)
G1170826 NA other downstream 707930 36110102 ~ 36110439 (-)
G1170811 NA other downstream 726952 36090762 ~ 36091417 (-)
G1171149 NA other upstream 55591 36884018 ~ 36884340 (-)
G1171337 NA other upstream 369801 37198228 ~ 37198640 (-)
LOC110486310 LOC106601114 other upstream 2352347 39136920 ~ 39183852 (-)
LOC110486313 snn other upstream 2419725 39248150 ~ 39250310 (-)
LOC110486318 kdm8 other upstream 2499789 39328216 ~ 39331966 (-)

Expression


Co-expression Network