LOC110486265 (LOC106601029)


Basic Information

Item Value
gene id LOC110486265
gene name LOC106601029
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 37486500 ~ 37502910 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557723.2
GGCTGGCTCTGCGATCGAGCTAATTTTTGGGACTGTCTATCTACACGCAAACTAACATACAGCGCTTGGCTTGATTACAGCTGCGGTGTATTAGTAGTTCCTTCATACTTTAATGATTCATCTGTCTATTCCTGAGGGTCACAGAATTAACCTGGGGATTTTTTGGGTGCTGAGAAGTTTGCTGTTCTGAAGTTTCATTACAATTTATTTTCCTGTTTATTTAGCTttctctatatatttttttgtcatgaaATTAACTTGAACGTATTGAACAGCTAATATAACTTCTGCCAAGGaaatatattttctctctctccaatcgGACTGCAATAACAATGATGAACAAGAACGGGATGGTGACGAAGATTCACACGAGAATTAGGACCGATCCTTTCACGAGCAATTATGAGTTGCTTGGCAGAGAATTGGGCAGGGGAAAGTTTGCTGTGGTGAAGAAGTGCATTGAGAAGGCGACAGGGAAGGAGCACGCTGCCAAGTTCTTGAGGAAGCGTCGGAAGGGCGAGGACTGCCGCATGGACATCCTCAACGAGATCGCTGTTCTGGAGTCAGCCAAGGCTAACCCTTATGTGGTGGCGCTGCATGAGGTCTACGAGACCAACTCTGAGATCATCCTCATCCTCGAGTGTGCTGCCGGTGGAGAGATCTTCAACCAGTGTGTTGCGGAGAACGACGAGGCCTTCACAGAGAAGGATGTGATCAGGTTGGCCAGACAGATCCTCACCGGCGTGGCCTGTCTGCACCGCAACAACGTGGTCCACTTGGACCTGAAGccccagaACATCCTGCTGACCAGTGCCATCCCACTAGGTGATATCCGCATCGTGGACTTTGGCCTGTCCAGACGCATGGACAATGTGACAGAAGTCCGAGAGATCCTGGGCACCCCGGAGTATGTGGCTCCAGAGATCCTGAACTATGAACCCATCAGCATAGCGACAGACATGTGgtCCATAGGGGTCCTGACCTACGTCATGCTGACGGGCGAGTCTCCGTTCCTGGGGGACAACAAGCAGGAGACCTTCCTAAACATCTCCCAGATCAACGTGGACTACTCCCAGGATGCCTTCGAGGGCATCTCCTCCCTCGCCATTGACTTCATCAAGACCCTGCTGCTCAAAAACCCCAGGAAGAGAGCCACTGCAGCAGAGTGCCTTAACCACCCCTGGCTGAATGGACCAGCTGACCTTTACACACAGCTCCACGCCAGCTCTCTACCCTCATTGGACGAGCCTGAGACCAGCCAATCAGAGTCTGAGCCTGAGAGCCCGGCACCCTCCCCAGAGCTGGAGAGCATGGGTTCGTACCTGATGTGCCCCGGTCAGGTAGACCTGAAGACGGGCCGCAATGCCTTTTCCTTCACTTCTGAGCCCTTCCCCGCACTGCCAGAGATCCAACAGGAGCTCATCTGCTGAGGAAGGGCTCCACTAGACACTGTGTGTAGTGACTGACTGGACTGCTGTCACAGAATGGACACTGTCTGGAAGCCAGTGAGACTTGGTCTGGTCCTACGCAGGGCCTCCAGCTCTGTTTTGACTCTGTATgtgtgctgctgctactgctgcgaTGGATGTGTGATCTCTGTCTGAGCTCAGCTGACTGTGTGCAGTAAATCCATGCGTGTTTGATGCATGTTACCCTGTGCTGATTAGTGTGCTGATGCGTGGCGTCTGGTAATGAGCCACACTGACACACTTTTAATGCATGTGTAGCGAGGGTACTGTAACTGTATGAGTGCTGTGAATGGAAGGAGTGGGCCAGTTCTTTGTGCTCGGCTATGAAGACTAGAACAGTGGGACTGACTTCATCCATCACTTGGTCTGGTCTGCACTCTGTGAGTCCTACTTTGTCCCAGGCTGGGTTGATCCCACGTTGGCCCTCAACCTGGCTCTCACCTTGGCTGCCCTTCACGTTCCACTCCCTAACTGACCTTTGAACCTGtacttctcctctcctttgtGAGGATGTAACTGCTCACCCTGAGAGGAAATGACGTTGGCCAACAGGAAGTTGGAACCACTTTGCTTTTGTTGAGGTCTGAGCCTTAAATGCCTTTCATGATGATGTTGATTATGAAGGATGCCTATGTGGTTAGACAGATGTCCCTAGATGAGATGCTGCCTACGCAGCAAAGGAAACCTAACTGACGGACTGTGTTCGGGGAGTGCCCTCACAGAAACCAGTCAGAAGGGTTAAATAGTCCTCTCTGATTTTGTTTGTTCATATGACCACTTCAGGCCCCCAAAACATAGAAAGCCATCTCAATCACCAATCTAATTAAATCACATCCTTTGTTTAGTGGTAAGGACAATCTTGATGTCAATTTAAAGCacttttttattttaagaatgaacTACACAAATGGTCAGAAAGTAATAACCAAAGTCTTGATGAAATGGCTCAAAAAGCACAGTTTAGTTAAGACACAAATGTACATGGCCACTTCCCACCATCTATTGTTAATATATTTGCATCACTCGTTTCCACCAAGTGCCATATAGTTCACCTGTTGTGTTTCTGTTTATTCTTGTGAGATATATTTTTTTTGCTATTGTTGCACAATTTCCATGTACTCATGTTTTGAAATATCAGTTTGCCATGTTGGATATGTCACAATATATTTCCCTTTCTTCAGGCTTTGTGAACCGATGTCTTTTTGAAGAGGAAGTGACTAGGATTCAATGATTTGCAACCAATTGAAAGGCTTTGAAGAGAGCTCGTTTTGGATATGTGGTGTTTGAGTGAAGATCACTTACTCTTGAGGGCTTCTCAAAAAGTACTGAAGTGTATATTGTTTGATAGTGTAAGAATAATCTGTAAAATATTTTAATATCCATAATGTATGAACATTTTAATAATTATTGTATGCCtccttttttgtttttgtttatttttatcttGACTCTGTACTTATGACTTTCATTCCTGGTTACTGCTCATGGAATTTCAGGCAGGTTTGCACTTGTGTCCAGGTGGACGTTACATTGAAATGAATAAATGTTGATGGCATGCCTCGCAAAAATGTATCGAAGAAcaataaatgtacattttgtattAAACTATTCATCTTGATGAATTGA

Function

NR:

description
serine/threonine-protein kinase 17A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557723.2 True 3098 mRNA 0.46 7 37486500 37502910

Neighbor

gene id symbol gene type direction distance location
LOC110486263 LOC106607299 coding downstream 31021 37426664 ~ 37455479 (-)
rbtstat3 LOC106607297 coding downstream 61084 37398223 ~ 37425416 (-)
stat5 stat5 coding downstream 91199 37293710 ~ 37395301 (-)
LOC110486262 LOC106607294 coding downstream 202386 37190627 ~ 37284114 (-)
LOC110486261 LOC106601048 coding downstream 299514 37183781 ~ 37186986 (-)
LOC110486267 LOC106607302 coding upstream 86038 37588948 ~ 37604528 (-)
LOC110486268 LOC106607304 coding upstream 106354 37609264 ~ 37617259 (-)
LOC110485166 LOC106607305 coding upstream 125592 37628502 ~ 37631611 (-)
LOC110486270 LOC106601037 coding upstream 144187 37647097 ~ 37651150 (-)
LOC110486271 LOC106607308 coding upstream 245695 37748605 ~ 37771147 (-)
G1171454 NA non-coding downstream 7009 37478292 ~ 37479491 (-)
G1171418 NA non-coding downstream 60104 37425792 ~ 37426396 (-)
G1171331 NA non-coding downstream 298281 37187931 ~ 37188219 (-)
G1171330 NA non-coding downstream 299047 37187177 ~ 37187453 (-)
G1171325 NA non-coding downstream 306392 37179834 ~ 37180108 (-)
G1171475 NA non-coding upstream 15216 37518126 ~ 37520420 (-)
G1171493 NA non-coding upstream 41890 37544800 ~ 37545171 (-)
G1171494 NA non-coding upstream 43338 37546248 ~ 37546459 (-)
G1171514 NA non-coding upstream 71863 37574773 ~ 37575012 (-)
G1171517 NA non-coding upstream 75677 37578587 ~ 37578797 (-)
G1171337 NA other downstream 287860 37198228 ~ 37198640 (-)
G1171149 NA other downstream 602160 36884018 ~ 36884340 (-)
G1171057 hsp70b other downstream 658075 36665169 ~ 36828425 (-)
G1171051 NA other downstream 889859 36595832 ~ 36596641 (-)
G1171050 NA other downstream 891974 36594054 ~ 36594526 (-)
LOC110486310 LOC106601114 other upstream 1677864 39136920 ~ 39183852 (-)
LOC110486313 snn other upstream 1745242 39248150 ~ 39250310 (-)
LOC110486318 kdm8 other upstream 1825306 39328216 ~ 39331966 (-)
G1173645 NA other upstream 2421012 39923922 ~ 39924959 (-)
G1174658 NA other upstream 2813208 40316118 ~ 40316859 (-)

Expression


Co-expression Network