Item | Value |
---|---|
gene id | LOC110486305 |
gene name | LOC106607338 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 38934103 ~ 38962100 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
integrator complex subunit 1-like isoform X1 |
id | description |
---|---|
K13138 | INTS1; integrator complex subunit 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021557794.2 | False | 6931 | mRNA | 0.56 | 48 | 38934103 | 38962001 |
XM_021557791.2 | False | 7033 | mRNA | 0.55 | 48 | 38934103 | 38962100 |
XM_021557792.2 | False | 7080 | mRNA | 0.55 | 48 | 38934121 | 38962001 |
XM_021557793.2 | True | 7076 | mRNA | 0.55 | 48 | 38934121 | 38962001 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486303 | LOC106607336 | coding | upstream | 30415 | 38880258 ~ 38903688 (+) |
LOC110486302 | LOC106607335 | coding | upstream | 56131 | 38876161 ~ 38878379 (+) |
rrmj2 | rrmj2 | coding | upstream | 347106 | 38579499 ~ 38586997 (+) |
LOC110486298 | LOC106607331 | coding | upstream | 361040 | 38554081 ~ 38573063 (+) |
LOC110486296 | LOC106607332 | coding | upstream | 451998 | 38474403 ~ 38482105 (+) |
LOC110487539 | LOC106607115 | coding | downstream | 5418 | 38967518 ~ 38970243 (+) |
LOC110486306 | LOC106601118 | coding | downstream | 13190 | 38975290 ~ 38990960 (+) |
LOC110486308 | zfn2b | coding | downstream | 121381 | 39083481 ~ 39092678 (+) |
LOC110486309 | LOC106601153 | coding | downstream | 149112 | 39073946 ~ 39123055 (+) |
trnat-cgu-5 | NA | coding | downstream | 225058 | 39187158 ~ 39187229 (+) |
G1172292 | NA | non-coding | upstream | 38811 | 38861710 ~ 38895292 (+) |
G1172288 | NA | non-coding | upstream | 75553 | 38858163 ~ 38858550 (+) |
G1172282 | NA | non-coding | upstream | 81653 | 38852247 ~ 38852450 (+) |
G1172278 | NA | non-coding | upstream | 87105 | 38846775 ~ 38846998 (+) |
G1172273 | NA | non-coding | upstream | 95095 | 38838666 ~ 38839008 (+) |
G1172353 | NA | non-coding | downstream | 39570 | 39001670 ~ 39001873 (+) |
G1172553 | NA | non-coding | downstream | 99777 | 39061877 ~ 39063105 (+) |
G1172647 | NA | non-coding | downstream | 162464 | 39124564 ~ 39124878 (+) |
G1172648 | NA | non-coding | downstream | 163372 | 39125472 ~ 39125717 (+) |
G1170455 | NA | other | upstream | 343396 | 38589772 ~ 38590707 (+) |
G1170322 | NA | other | upstream | 671250 | 38262414 ~ 38262853 (+) |
G1170288 | NA | other | upstream | 724582 | 38209235 ~ 38209521 (+) |
G1170195 | NA | other | upstream | 911582 | 38021849 ~ 38022521 (+) |
G1172996 | NA | other | downstream | 511358 | 39473458 ~ 39473779 (+) |
G1173715 | LOC106601095 | other | downstream | 1118374 | 40080474 ~ 40200482 (+) |
polr3k | rpc11 | other | downstream | 1392242 | 40354342 ~ 40357833 (+) |
G1174211 | NA | other | downstream | 1943431 | 40905531 ~ 40906473 (+) |
G1174245 | LOC106607208 | other | downstream | 2039783 | 41001883 ~ 41003024 (+) |