Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486306 |
| gene name | LOC106601118 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38975290 ~ 38990960 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| MICAL-like protein 2 isoform X1 |
| id | description |
|---|---|
| K21068 | MICALL2, JRAB; MICAL-like protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557795.2 | False | 4013 | mRNA | 0.46 | 19 | 38975290 | 38990960 |
| XM_021557796.2 | False | 4011 | mRNA | 0.45 | 18 | 38975338 | 38990960 |
| XM_036941015.1 | False | 4049 | mRNA | 0.46 | 18 | 38975339 | 38990960 |
| XM_036941016.1 | True | 3904 | mRNA | 0.46 | 19 | 38975406 | 38990960 |
38,970,000
38,972,000
38,974,000
38,976,000
38,978,000
38,980,000
38,982,000
38,984,000
38,986,000
38,988,000
38,990,000
38,992,000
38,994,000
38,996,000
38,998,000
39,000,000
39,002,000
39,004,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487539 | LOC106607115 | coding | upstream | 5047 | 38967518 ~ 38970243 (+) |
| LOC110486305 | LOC106607338 | coding | upstream | 13190 | 38934103 ~ 38962100 (+) |
| LOC110486303 | LOC106607336 | coding | upstream | 71602 | 38880258 ~ 38903688 (+) |
| LOC110486302 | LOC106607335 | coding | upstream | 97318 | 38876161 ~ 38878379 (+) |
| rrmj2 | rrmj2 | coding | upstream | 388293 | 38579499 ~ 38586997 (+) |
| LOC110486308 | zfn2b | coding | downstream | 92521 | 39083481 ~ 39092678 (+) |
| LOC110486309 | LOC106601153 | coding | downstream | 120252 | 39073946 ~ 39123055 (+) |
| trnat-cgu-5 | NA | coding | downstream | 196198 | 39187158 ~ 39187229 (+) |
| LOC110486312 | LOC106607341 | coding | downstream | 232908 | 39223868 ~ 39234624 (+) |
| litaf | litaf | coding | downstream | 259374 | 39250334 ~ 39253623 (+) |
| G1172292 | NA | non-coding | upstream | 79998 | 38861710 ~ 38895292 (+) |
| G1172288 | NA | non-coding | upstream | 116740 | 38858163 ~ 38858550 (+) |
| G1172282 | NA | non-coding | upstream | 122840 | 38852247 ~ 38852450 (+) |
| G1172278 | NA | non-coding | upstream | 128292 | 38846775 ~ 38846998 (+) |
| G1172273 | NA | non-coding | upstream | 136282 | 38838666 ~ 38839008 (+) |
| G1172353 | NA | non-coding | downstream | 10710 | 39001670 ~ 39001873 (+) |
| G1172553 | NA | non-coding | downstream | 70917 | 39061877 ~ 39063105 (+) |
| G1172647 | NA | non-coding | downstream | 133604 | 39124564 ~ 39124878 (+) |
| G1172648 | NA | non-coding | downstream | 134512 | 39125472 ~ 39125717 (+) |
| G1170455 | NA | other | upstream | 384583 | 38589772 ~ 38590707 (+) |
| G1170322 | NA | other | upstream | 712437 | 38262414 ~ 38262853 (+) |
| G1170288 | NA | other | upstream | 765769 | 38209235 ~ 38209521 (+) |
| G1170195 | NA | other | upstream | 952769 | 38021849 ~ 38022521 (+) |
| G1172996 | NA | other | downstream | 482498 | 39473458 ~ 39473779 (+) |
| G1173715 | LOC106601095 | other | downstream | 1089514 | 40080474 ~ 40200482 (+) |
| polr3k | rpc11 | other | downstream | 1363382 | 40354342 ~ 40357833 (+) |
| G1174211 | NA | other | downstream | 1914571 | 40905531 ~ 40906473 (+) |
| G1174245 | LOC106607208 | other | downstream | 2010923 | 41001883 ~ 41003024 (+) |
