il21r (il21r)


Basic Information

Item Value
gene id il21r
gene name il21r
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 39300023 ~ 39306398 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124623.1
CTATTTGTGTAAAGTGACAAATGATTGTTATCACTATATATCGTATGAAGACTATATACTGATTTATAGattcattgttttttgtttgttcttttaAGGAATGAGTACGTCCTCAAAACTATAATATATGATCATTGTGTGGATTGAATTATACTGTGTGGTTTACTCTCAAGTATTCAGCAACAATGTTTATATTGCTTATTATAGTCACAACGCTTGGGACTTTGATAGCTGATGATGCAATGAGTGACGGAAATATTCAATGCTTCAACGACTATGACGAAACTATGGTTTGTCATTTTATAACTGACAAGTCTAAGTGTGCTGAATACAGCATGACGTTGAAACAATTGAACGCACAAAATAGAGGCAAAAATGATTGTACTTTCAAGGAAAAGGAGAGGTCCAATGATGTTTCCAAATGTGGATGCTCTATTGATCCAATGCCCCTTATTTCTGGGGAGGAGTTTAATGCAACACTTTGGAATTCTGGGAAGCGCCTAAATTCCGAAGTCTTCAGTATCAATTACACCATAAAACCCAAAACCCCCACCATCCAAGATGTGAAACCAACAGAAAATGGGAATTTCCTGGTCAAATGGAAGACAAACTACACTGATAAGGAAGAGTTTTCTAAGAACTTGATTGCCGAATTGAGCTACAGAAAGAAAGGAGAAACAGATGAGGTGTCCAAAAATGAATCAACAACTTCCTATGAATTACTTGGCAGAGACTTGGAGCCAAACACCATTTATGCTCTGAAGGTCAGAACCTATACTGACTGGAGCGGCCGTTTCAGTGACTGGAGTGAAGAGTTGGAATTCACTAACCCTGCATCATCTCGGAAAGTGCTCCAGATTGTCATTGTTTTCAGCTGCATTGCTGTTATCATCATCACAAGTGCTTTGTTTTGGTGCAGTGTTAGACTCAAAACCAAGTTGTGGGATAATATTCCTCAATGTTCAAACCCAGACCTTTTGTATATGGTTCCAGCAGTACCTAAGGTATTGTCTCCTCCCAAAATACTTTTATCCTCCATCtatgttgattcttcaaaaatgGACACCGAAGAAAAAACATGGACAAACCCCGCGACAGTAGATGGGAGCAGTGGAAGAGGCCGTGGCTCAGAGCTTGACTCATCGTCTTCCCTGGGTCATGCCCACACATGTTCCATGAGCCCAGAGCCTAGTAATGTGCAGATCATTAGCCATCTTCAAGAGGCCCTGAGCAAAGTCTTTCCCAGCCTTGTTCCTTTGGATGGGAATCCTCAGTCATTGCTCTTAGCCCCTCCTATGATAGATGATGGTACAGAAATGAACTGCCCTGAGTCAAATCGAGACATTGGTGTGTGTTCATCTGACTACAATCCTCTTCATTTCATGAGTGAGTCTGGAGGCTCTTGTTACAACAATAATACCTACTCCCCCTCAGTGCCCATCAACTCCCTTCAAGAGTTAACACCAAGCAAGACGTCCTCATTTCCTACGCGGCCTCTGCTCTTTTGTAACTCCTCCTACTATTCTGGTGAGGCTGAAGGGTTGAGAAATGGCCATCCACAGCTGTTTCTTGGTACTGGTCAACAAGACCTTAATTTGTCCACTAACTGTGAACCCCTCTTGCAAACCGACAATTCATTTCACCCGTGTGATGGCGCCAGTGATGATTCAGAGACTACCACGTCATCAGAGGACACCAGTCTGATCTACGGTTCTAACGTGTCCGATGTTATCAGTGTCGTTGCTGGATATCAGAGCTTCAGTGAGGCGGTTGGTAAGGACAGTGAGAGAGGAACTGATGCCTTCATAGATGTGACACTGCCACTTAAGGGTTTCCAGGATGTGGACAGAGAGCCTCTGATTTACGATGTGGATCCATGTTACCACAGCCTGCCTGACGCTGGATGCAGCCTCCCCCCGAGTGATGGCAATTATCAGGCTTTACAGAGCCTGGGACAAAATTGCCCAGATCAGTGGGTTTCAGACAAACTGCTGAACAAGTGTCTGGAGACTGAGATCCCTCAAAGCTCCATGGGGAACATGCCTCTAAATGTCATACCCAACTCACAGGGAGGACAATGTCGGATACCTGGAAGTCCCTTTCTTACTTTCTGTTCAGACCAAGCAATGCAAATAGACAATGACAGCTCTTATCATGGTGTAGACGGTAGACACTTTTGCACttcacaatttattttattttggggaCTTGagctcatatatatatatgttttttctaTATTATACAAACAGTTTGAATACCATTCTGCCATGAAAATTCTGTAGTCTCAagtccagaaatgttccacattttGGATGTACTGCTTCTGTAAATAAACATTTGTGTGTGGGAAACTGCAACAGTTAATTGTTGAAGCGATACAA
>XM_036939699.1
aacaaaaacaaagcttGCGTGCGTGCGTTATGGTCATAGGAGGAGGGGGGACGACCAAAAGATCTTCCCATGAAAGGTGTGTCCTGTTGGAACTGTAATTTCCAGTAAGCAATTCGCAACCGCAGCTATTTCTATTTGTGTAAAGTGACAAATGATTGTTATCACTATATATCGTATGAAGACTATATACTGATTTATAGattcattgttttttgtttgttcttttaAGGAATGAGTACGTCCTCAAAACTATAATATATGATCATTGTGTGGATTGAATTATACTGTGTGGTTTACTCTCAAGTATTCAGCAACAATGTTTATATTGCTTATTATAGTCACAACGCTTGGGACTTTGATAGCTGATGATGCAATGAGTGACGGAAATATTCAATGCTTCAACGACTATGACGAAACTATGGTTTGTCATTTTATAACTGACAAGTCTAAGTGTGCTGAATACAGCATGACGTTGAAACAATTGAACGCACAAAATAGAGGCAAAAATGATTGTACTTTCAAGGAAAAGGAGAGGTCCAATGATGTTTCCAAATGTGGATGCTCTATTGATCCAATGCCCCTTATTTCTGGGGAGGAGTTTAATGCAACACTTTGGAATTCTGGGAAGCGCCTAAATTCCGAAGTCTTCAGTATCAATTACACCATAAAACCCAAAACCCCCACCATCCAAGATGTGAAACCAACAGAAAATGGGAATTTCCTGGTCAAATGGAAGACAAACTACACTGATAAGGAAGAGTTTTCTAAGAACTTGATTGCCGAATTGAGCTACAGAAAGAAAGGAGAAACAGATGAGGTGTCCAAAAATGAATCAACAACTTCCTATGAATTACTTGGCAGAGACTTGGAGCCAAACACCATTTATGCTCTGAAGGTCAGAACCTATACTGACTGGAGCGGCCGTTTCAGTGACTGGAGTGAAGAGTTGGAATTCACTAACCCTGCATCATCTCGGAAAGTGCTCCAGATTGTCATTGTTTTCAGCTGCATTGCTGTTATCATCATCACAAGTGCTTTGTTTTGGTGCAGTGTTAGACTCAAAACCAAGTTGTGGGATAATATTCCTCAATGTTCAAACCCAGACCTTTTGTATATGGTTCCAGCAGTACCTAAGGTATTGTCTCCTCCCAAAATACTTTTATCCTCCATCtatgttgattcttcaaaaatgGACACCGAAGAAAAAACATGGACAAACCCCGCGACAGTAGATGGGAGCAGTGGAAGAGGCCGTGGCTCAGAGCTTGACTCATCGTCTTCCCTGGGTCATGCCCACACATGTTCCATGAGCCCAGAGCCTAGTAATGTGCAGATCATTAGCCATCTTCAAGAGGCCCTGAGCAAAGTCTTTCCCAGCCTTGTTCCTTTGGATGGGAATCCTCAGTCATTGCTCTTAGCCCCTCCTATGATAGATGATGGTACAGAAATGAACTGCCCTGAGTCAAATCGAGACATTGGTGTGTGTTCATCTGACTACAATCCTCTTCATTTCATGAGTGAGTCTGGAGGCTCTTGTTACAACAATAATACCTACTCCCCCTCAGTGCCCATCAACTCCCTTCAAGAGTTAACACCAAGCAAGACGTCCTCATTTCCTACGCGGCCTCTGCTCTTTTGTAACTCCTCCTACTATTCTGGTGAGGCTGAAGGGTTGAGAAATGGCCATCCACAGCTGTTTCTTGGTACTGGTCAACAAGACCTTAATTTGTCCACTAACTGTGAACCCCTCTTGCAAACCGACAATTCATTTCACCCGTGTGATGGCGCCAGTGATGATTCAGAGACTACCACGTCATCAGAGGACACCAGTCTGATCTACGGTTCTAACGTGTCCGATGTTATCAGTGTCGTTGCTGGATATCAGAGCTTCAGTGAGGCGGTTGGTAAGGACAGTGAGAGAGGAACTGATGCCTTCATAGATGTGACACTGCCACTTAAGGGTTTCCAGGATGTGGACAGAGAGCCTCTGATTTACGATGTGGATCCATGTTACCACAGCCTGCCTGACGCTGGATGCAGCCTCCCCCCGAGTGATGGCAATTATCAGGCTTTACAGAGCCTGGGACAAAATTGCCCAGATCAGTGGGTTTCAGACAAACTGCTGAACAAGTGTCTGGAGACTGAGATCCCTCAAAGCTCCATGGGGAACATGCCTCTAAATGTCATACCCAACTCACAGGGAGGACAATGTCGGATACCTGGAAGTCCCTTTCTTACTGTTTCTGTTCAGACCAAGCAATGCAAATAGACAATGACAGCTCTTATCATGGTGTGTAGACGGTAGACACTTTTGCACttcacaatttattttattttggggaCTTGagctcatatatatatatgttttttctaTATTATACAAACAGTTTGAATACCATTCTGCCATGAAAATTCTGTAGTCTCAagtccagaaatgttccacattttGGATGTACTGCTTCTGTAAATAAACATTTGTGTGTGGGAAACTGCAACAGTTAATTGTTGAAGCGATACAA

Function

symbol description
il21r Enables cytokine receptor activity. Predicted to be involved in interleukin-21-mediated signaling pathway. Predicted to be located in plasma membrane. Implicated in B-cell lymphoma (multiple); Crohn's disease; autoimmune disease (multiple); human immunodeficiency virus infectious disease; and immunodeficiency 56. Biomarker of atopic dermatitis; inflammatory bowel disease; and multiple sclerosis.

NR:

description
interleukin-21 receptor isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124623.1 False 2384 mRNA 0.42 12 39300023 39306267
XM_036939699.1 True 2519 mRNA 0.43 10 39300023 39306398

Neighbor

gene id symbol gene type direction distance location
LOC110486317 LOC100194516 coding downstream 12687 39281943 ~ 39287336 (-)
LOC110486315 LOC106607344 coding downstream 24390 39255819 ~ 39275633 (-)
LOC110486314 cp075 coding downstream 45228 39254030 ~ 39254795 (-)
LOC110486313 snn coding downstream 49728 39248150 ~ 39250310 (-)
LOC110486311 LOC106601151 coding downstream 76701 39220079 ~ 39223322 (-)
LOC118936372 il21r coding upstream 8924 39315322 ~ 39322438 (-)
LOC110486318 kdm8 coding upstream 21969 39328216 ~ 39331966 (-)
LOC110486320 LOC106607349 coding upstream 220375 39526773 ~ 39615110 (-)
LOC110486323 LOC106607351 coding upstream 433024 39739422 ~ 39760173 (-)
LOC110486334 LOC106607235 coding upstream 777271 40083669 ~ 40096704 (-)
G1172823 NA non-coding downstream 20159 39278521 ~ 39279864 (-)
G1172816 NA non-coding downstream 113927 39185796 ~ 39186096 (-)
LOC110486310 LOC106601114 non-coding downstream 116171 39136920 ~ 39183852 (-)
G1172811 NA non-coding downstream 125500 39174308 ~ 39174523 (-)
G1172658 NA non-coding downstream 168808 39130975 ~ 39131215 (-)
G1172905 NA non-coding upstream 59464 39365862 ~ 39366086 (-)
G1172910 NA non-coding upstream 62860 39369258 ~ 39369479 (-)
G1172913 NA non-coding upstream 63989 39370387 ~ 39370652 (-)
G1172924 NA non-coding upstream 67746 39374144 ~ 39375370 (-)
G1172934 NA non-coding upstream 79557 39385955 ~ 39386293 (-)
G1171337 NA other downstream 2101383 37198228 ~ 37198640 (-)
G1171149 NA other downstream 2415683 36884018 ~ 36884340 (-)
G1171057 hsp70b other downstream 2471598 36665169 ~ 36828425 (-)
G1173645 NA other upstream 617524 39923922 ~ 39924959 (-)
G1174658 NA other upstream 1009720 40316118 ~ 40316859 (-)
G1174741 NA other upstream 1150497 40456895 ~ 40457681 (-)
LOC110486364 LOC106601288 other upstream 1527505 40831402 ~ 40843483 (-)

Expression


Co-expression Network