LOC118936300 (LOC100135791)


Basic Information

Item Value
gene id LOC118936300
gene name LOC100135791
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40614297 ~ 40615287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941060.1
ACGCTGCTCAAACTAAGACCAAGTGTATATGATTCGTTAGACTCTGTGAAAGAAACTTCAACAGCCAGCAACATGGTTCAGTGGACAGACTTTGAGCGCGCCACCATTCAGAGCGTCTTCGAGAAGATGGACTACGATGACGTAGGCCCCGCGGCTCTTTCCAGGTGTCTGGTCGTGTACCCCTGGACCCAGAGGTATTTTGGTAACTTCGGAAACCTGTACAACGCCGCTGCTATCCAGGGAAACCCAATGGTCGCCGCTCACGGAAAGACAGTCCTGCACGGACTGGACCGGGCTGTCAAGAACATGGATGACATCAAGGCCACATACGCAGAGCTGAGCGTGCTGCACTCCGAGAAACTGCGCGTGGATCCCGACAACTTCCGGCTGCTGGCTGACTGCCTTACTATTGTCGTTGCTGCGAGAATGGGTGCTGCCTTCACCGCTGACGTCCAGGGTGCTTTCCAGAAGTTCCTGGCGGTCGTGGTGAGCTCCCTGGGCAAACAGTACCACTAGAGCAAACAGTACCACTAGAGCAAACAGTACCACTAGAACCCCTCCACTCAGAGACGGACGACCATCAGAGAACCAACAAGCGCTGATCATTTGTTTAGAGGCACATGTTGTTCCTTCTACTAAAGCAAATAAAATCAGCGAATTAATATTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941060.1 True 668 mRNA 0.52 3 40614297 40615287

Neighbor

gene id symbol gene type direction distance location
LOC118938287 LOC106609103 coding upstream 21310 40588722 ~ 40592987 (+)
LOC118938288 NA coding upstream 31024 40580691 ~ 40583273 (+)
LOC100136296 LOC100136296 coding upstream 34778 40578421 ~ 40579519 (+)
LOC110486354 LOC106607383 coding upstream 40814 40572568 ~ 40573483 (+)
LOC110486353 LOC106601071 coding upstream 72560 40540811 ~ 40541737 (+)
LOC118938289 NA coding downstream 3153 40618440 ~ 40619466 (+)
LOC110486355 LOC106601061 coding downstream 7672 40622959 ~ 40623862 (+)
LOC110486361 NA coding downstream 65888 40681175 ~ 40683181 (+)
LOC100136169 LOC106607222 coding downstream 98906 40714193 ~ 40733821 (+)
LOC110486371 LOC106607212 coding downstream 318600 40933887 ~ 40967545 (+)
G1173986 NA non-coding upstream 37094 40576218 ~ 40577203 (+)
G1173987 NA non-coding upstream 42272 40569804 ~ 40572025 (+)
G1173990 NA non-coding upstream 136855 40476588 ~ 40477442 (+)
G1173964 LOC106607368 non-coding upstream 166982 40446307 ~ 40447315 (+)
G1173959 NA non-coding upstream 181159 40432395 ~ 40433138 (+)
G1174047 NA non-coding downstream 9074 40624361 ~ 40624631 (+)
G1174055 NA non-coding downstream 22387 40637674 ~ 40639607 (+)
G1174069 LOC106607387 non-coding downstream 49640 40664927 ~ 40665150 (+)
G1174070 NA non-coding downstream 51888 40667175 ~ 40667968 (+)
G1174071 LOC106601059 non-coding downstream 52785 40668072 ~ 40669829 (+)
polr3k rpc11 other upstream 258324 40354342 ~ 40357833 (+)
G1173715 LOC106601095 other upstream 458118 40080474 ~ 40200482 (+)
G1172996 NA other upstream 1140518 39473458 ~ 39473779 (+)
LOC110486302 LOC106607335 other upstream 1735918 38876161 ~ 38878379 (+)
G1170455 NA other upstream 2023590 38589772 ~ 38590707 (+)
G1174211 NA other downstream 290244 40905531 ~ 40906473 (+)
G1174245 LOC106607208 other downstream 386596 41001883 ~ 41003024 (+)
LOC110486375 LOC106601281 other downstream 440165 41055429 ~ 41065432 (+)
G1175164 NA other downstream 924204 41539491 ~ 41540680 (+)
LOC110486395 ccd56 other downstream 1158203 41773456 ~ 41777013 (+)

Expression


Co-expression Network