LOC110486361



Basic Information


Item Value
gene id LOC110486361
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40681175 ~ 40683181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021557888.2
CATTACTGATATCCGATGTGAGATGAAAAAGATACTACAGACCTGAGGCACTTAGACATACAGCTGAGAAAAGGTACCTTTTTAACGACAACTGAGGATCAACAACACCCTTAACAAAGCTTTAAGACAAACAGGCATAGGAAGGGGCACTGGGCGATTCTCACAAGATTTCGAGTCGATAGTCTCTCTGAAGAGATAAATAAATCATCTCTCTATATAGCCTCTGTCCTCAGGTCAGGATGAGGGCCACACTACTCTGCCTGCTGTGTATGGCCATGTGTTTAACAGGGATCCCAGCCAGCCCCGTCCGGAAGGCCCAGAAGAACAACCAGGCTGCCCCCATTGATGACATGAACGTGCTGATGTATGGCGTGCTGCAGTTCAGCGAGACCCTGCACCACGTCTACGAGAGCACCGATGCCAAGTTCGCGCGGATCGAGAGGTCGCTGAGGAGACAtgaggagaggctggagaggcTGGGCCAGGAGGCAGGCCAGGCCGCAGAGAAGGACAGACAGATGAGACAGGTGCTAGGACAGATACAGGGCCAGATGGCTGGGCTGCAGTCAGAGGCTGAGGAGGCCGAGGGCAAGGTGGCCCgggtggagcaggaggagggggaTCTTAGGACCAAGGTGATCAACCTGGAGACATACCTTCAGAACTACCCCCCCAACAGCATACAGGAATTAAAGGATAGAGCGTTAAAACACTCCAGAGTTCTGGAGGGCCTGCTAACATGGACACAGTTCCAAAAACAGAGCATTGAGAGTCAGAACCAACAGTTGACCAAGCTACAGAAACTGAGTGAAGCCAGGAGACAGCCAGTCCTTAGTCACATCGCCTGATGGTTCCGCTGAATCTTAACACCAGCTACTGTAGCTAATACACTCCATGACTTTACCCTGGTGCATAAATACCGTCTACTCGTTCAACCATAATTCACACAGAACAAACATTCCCACCCAATAAACAGAATTACAATAACATGATATATTTATACCACTGTATTATATTTCCGAATACAATTAATTGTGTTCAACACAAGCCCTTTTTTTATTGTACATGTTCTTTATTTTAATTCTAATTCATGCTTACTGCTGTCATATTGTATATTTTGTGTGCAAATAAAAATCTGCAAATATCA

Function


NR:

description
uncharacterized protein LOC110486361

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021557888.2 True 1147 mRNA 0.47 4 40681175 40683181

Neighbor


gene id symbol gene type direction distance location
LOC110486355 LOC106601061 coding upstream 57313 40622959 ~ 40623862 (+)
LOC118938289 NA coding upstream 61709 40618440 ~ 40619466 (+)
LOC118936300 LOC100135791 coding upstream 65888 40614297 ~ 40615287 (+)
LOC118936354 NA coding upstream 66115 40610279 ~ 40615060 (+)
LOC118938287 LOC106609103 coding upstream 88188 40588722 ~ 40592987 (+)
LOC100136169 LOC106607222 coding downstream 31012 40714193 ~ 40733821 (+)
LOC110486371 LOC106607212 coding downstream 250706 40933887 ~ 40967545 (+)
LOC110486372 LOC106607210 coding downstream 292274 40975455 ~ 40989382 (+)
angptl6 LOC106607207 coding downstream 366263 41049444 ~ 41054649 (+)
LOC110486375 LOC106601281 coding downstream 372248 41055429 ~ 41065432 (+)
G1174080 NA non-coding upstream 3603 40677363 ~ 40677572 (+)
G1174078 NA non-coding upstream 4029 40676777 ~ 40677146 (+)
G1174077 NA non-coding upstream 4473 40675436 ~ 40676702 (+)
G1174076 NA non-coding upstream 6370 40674526 ~ 40674805 (+)
G1174075 NA non-coding upstream 7590 40673312 ~ 40673585 (+)
G1174120 NA non-coding downstream 61451 40744632 ~ 40748753 (+)
G1174135 NA non-coding downstream 85648 40768829 ~ 40769254 (+)
G1174155 NA non-coding downstream 128667 40811848 ~ 40812402 (+)
G1174185 LOC106607218 non-coding downstream 164175 40847356 ~ 40849081 (+)
G1174184 LOC106607218 non-coding downstream 167473 40850654 ~ 40851321 (+)
polr3k rpc11 other upstream 325202 40354342 ~ 40357833 (+)
G1173715 LOC106601095 other upstream 524996 40080474 ~ 40200482 (+)
G1172996 NA other upstream 1207396 39473458 ~ 39473779 (+)
LOC110486302 LOC106607335 other upstream 1802796 38876161 ~ 38878379 (+)
G1170455 NA other upstream 2090468 38589772 ~ 38590707 (+)
G1174211 NA other downstream 222350 40905531 ~ 40906473 (+)
G1174245 LOC106607208 other downstream 318702 41001883 ~ 41003024 (+)
G1175164 NA other downstream 856310 41539491 ~ 41540680 (+)
LOC110486395 ccd56 other downstream 1090309 41773456 ~ 41777013 (+)

Expression



Co-expression Network