Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486363 |
| gene name | LOC106607220 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40749095 ~ 40775504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cAMP-specific 3',5'-cyclic phosphodiesterase 4B-like isoform X2 |
| id | description |
|---|---|
| K13293 | PDE4; cAMP-specific phosphodiesterase 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557896.2 | False | 4438 | mRNA | 0.54 | 10 | 40749095 | 40764069 |
| XM_021557895.2 | True | 3240 | mRNA | 0.53 | 15 | 40749095 | 40775504 |
40,736,000
40,740,000
40,744,000
40,748,000
40,752,000
40,756,000
40,760,000
40,764,000
40,768,000
40,772,000
40,776,000
40,780,000
40,784,000
40,788,000
40,792,000
NC_048577.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486362 | LOC106607221 | coding | downstream | 6145 | 40733709 ~ 40742950 (-) |
| LOC110486360 | LOC106607387 | coding | downstream | 48898 | 40578110 ~ 40700197 (-) |
| LOC110486359 | LOC106601060 | coding | downstream | 88272 | 40638211 ~ 40660823 (-) |
| LOC100135790 | LOC100135790 | coding | downstream | 118407 | 40629737 ~ 40630688 (-) |
| LOC110486356 | LOC106607377 | coding | downstream | 120709 | 40627548 ~ 40628386 (-) |
| LOC110486364 | LOC106601288 | coding | upstream | 55898 | 40831402 ~ 40843483 (-) |
| LOC110486365 | LOC106607218 | coding | upstream | 68547 | 40844051 ~ 40859686 (-) |
| LOC110486366 | LOC106607217 | coding | upstream | 88302 | 40863806 ~ 40869040 (-) |
| LOC110486367 | LOC106607216 | coding | upstream | 93647 | 40869151 ~ 40871662 (-) |
| LOC110486370 | LOC106607215 | coding | upstream | 97157 | 40872661 ~ 40883905 (-) |
| G1174844 | NA | non-coding | downstream | 390 | 40744625 ~ 40748705 (-) |
| G1174839 | NA | non-coding | downstream | 23259 | 40724686 ~ 40725836 (-) |
| G1174792 | NA | non-coding | downstream | 155223 | 40592979 ~ 40593872 (-) |
| G1174706 | NA | non-coding | downstream | 207268 | 40540779 ~ 40541827 (-) |
| G1174918 | NA | non-coding | upstream | 121157 | 40896661 ~ 40896873 (-) |
| G1174933 | NA | non-coding | upstream | 142375 | 40917879 ~ 40918146 (-) |
| G1174973 | NA | non-coding | upstream | 193991 | 40969495 ~ 40969699 (-) |
| G1174974 | NA | non-coding | upstream | 194927 | 40970431 ~ 40970768 (-) |
| G1174741 | NA | other | downstream | 291414 | 40456895 ~ 40457681 (-) |
| G1174658 | NA | other | downstream | 432236 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 824136 | 39923922 ~ 39924959 (-) |
| LOC110486318 | kdm8 | other | downstream | 1417856 | 39328216 ~ 39331966 (-) |
| LOC110486313 | snn | other | downstream | 1498785 | 39248150 ~ 39250310 (-) |
| col5a3a | LOC106607203 | other | upstream | 509278 | 41282052 ~ 41362985 (-) |
| G1175904 | LOC106607178 | other | upstream | 1221810 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 1223848 | 41999352 ~ 42000091 (-) |
| G1176164 | NA | other | upstream | 1552540 | 42328044 ~ 42328572 (-) |
