LOC110486385 (LOC100194731)


Basic Information

Item Value
gene id LOC110486385
gene name LOC100194731
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41564055 ~ 41567425 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557930.2
GCTCCTCGCAATCGCCTCCTCTATCCAGAACACCCCATGGTGTTTAGATGTTGGTTTTGAGAATGACTTCATTAGTTAAATGGATATTGATATTCTTTGGCCTGATCTCAGTAATAGCGAATATTGTCATTGTATGTCTTTACTCAGGTAGGCTGCCCAAATGCTCCTCGAAGCCGCATCATGTTTTCAAGGGAAAACACAATGAACGCAGCGCGGTGTTTGCTGACCTGTCCGCCGAGGAATATCTCCAAGTCCGCGACTATATGAGTAATCAGAAAGACTTAGATATTTCTGTCAATGCGCTTACAAAGCCTTCAGGGAATTTTCTCTTCTTAATTGATGTTTTGTTGCCAAGGAAAGCAGATGCGCTTGGCTACCTAGATAACAATAAGCCCAAGCCGGTGAGAGAGGCGACTGCGGTGGTTTTCTATGGCACCCTTGGGCACATTAAAGAATATGTGGTGGGACCTCTCCCCAACCCGATTTACCACCGCGATGTCACCGTTGAGAGGTATAAAGAAGAGTTGCCCATCAATGCGCGTACGGTCACCATTGGTGAATATGCACTTATTTCCAAGTTTATTAATGAAGAGGTATTTACAAAACTTGGTAAAATTGCGAAAGAAAGTTTTGATGTCAGTAAAGAGAAAACCCTGAATTATTTCGAAGGCATGCCTCGGGGTGTCAAatcgggagagagacagacatggatATCTTTCTTTCGTGATTTGAGTGGGATGTACATCCACCCTGTAGGTTTGGAAGTTTTAATCAACCACGAAAGCACCAACGCGTCTCTTTGGAGTGTGAAGAGATTACTTTATAACGGACAGTACTTCGACAGTGTGGAGGATCTTCTAAAACAATATGATGATGGAAAAGTGACTAAAATTGTGTATAAACCTGTCCAGAACTATGCATCACTCAAACTTAAAAGTAAACCCACCGGTTTAAGCCCTCAGCAGTTTTACGCGCAAGGTAAACGCTTCAGTGTCAAGAATAATCATGTTATGTATCTCGAATGGAGTTTTGCGTTTGGTCTGAGTTCCCTCACCGGTATGAGAGTTTTTGACGTTCGTTTCAAGGGGGAGAGGATAGCTTATGAGGTTAGTGTTCAAGAGGCAATGTCAGTTTATGGTTCCATCACACCCGGCATGATTCTGACTAAGTTTTTGGACTCTAGTATCGGAATAGGTCGCTTTGCGCACGAGCTCGTTCGAGGCGTGGATTGTCCGTACGCGGCAACCTACATCGACACTTTCCGATACATTGACGTCAGTGCACCTCAGAGATTCAGGAATTCAATTTGCCTTTTTGAGCACAATACAGGCCGTCCTCTCAGAAGACACTTTTCGGACTTTTTCAGCAATAGTTATGGTGGCATGGTTAACAGTGCCTTAGTTTTTAGGACCATTACGGCCATAGGTAACTATGACTACTTGTGGGACTTCATTTTTTATCAGAGCGGCTCTGTTGAGGCCAAAGTGCATGCCACTGGATACATATCGTCATCTTTCAATGTTGACGGCAATCTCAAATACGGACACCAGGTGGCAGAAAATACTATTGGGAACATCCACACTCATTTCATCAACTTCAAAGTTGACCTGGACGTGTTGGGGGTTGAGAATGTATTCCAGACCAAGGACATGAAGTTTATGAATGTGTCTTTACCCTGGATGCCGGAGCGCTATGCCATGGTTCCTCAGCTGGTGGAGGCCCAGCTAAAGACTGAGAAGGAGGCTGCTCTCCGCTACGACACCAAGACGCCACGCTACCTTCACATCGCCAGCAACCGCACCAACCGCTGGGGCCACCAGCGCTCCTACCGCCTCCAGGTGGTCAGCTTCACCGGTGACAGCCTTCCAGAGACGGAGCCAGAGGAGAAGTCCATGTCTTGGGCTAGGTATAAAGTGGCCATCACTAAGCACAAAGATTCCGAGCAGACCAGCAGTAGCCTGTACAGTCAGAACAACATGTGGACACCAGCAGTGGACTTCAGCAAGTACATTGAGGATGACGAGAGCATTGAAAACCAGGACCTGGTTGCCTGGGTAACCACCGGCTTCCTCCACATTCCTCATGCTGAGGACATCCCCAACACAGTTACCGTTGGAAATGGAGGCGGAGTGATCCTGAGACCACATAACTACTTTGATAAGGACCCGTCTATTCACTCTCCAGACGGGGTGTACATCAGCCCAGGGTCAGAGGGAAACTGTGAAAATAACAAGATGGCCTGCTTGGCTGAAGACGCATGCAGCCCAGTCGTTGAACCCTTCACCTACAATGGGTTTGAAGGGACCATAAAGTTTGAAGAGTGAAAAAAAAAGTCCCCAGTCCCAATCCTGAGTGTGCTCTGCACTAAACACTAAAACACTTATAAAAACGTGAATCTTGCCCAAGACAACATTTGAAATAATTAAGGAACAGCATTGGATTTCTAActtggcatggactctacaagttgtcaaaaagtgttccacagggatgctggcccaaattgactccaatgcttcccacagttgtttcaagttggctgggtgtcctttgggtggtggaccattcttgatacacacgggaaactgtttaaGAGTGGAAAAACCCAGCGGCGTTGCCGTGTGCCTGGCACCTGCTATCATACCCTGTCCAAcagcacttaaatcttttgtcttgcccattaacCCGCTAAATggtacactcactgtatatattcaACTCAATACAGTATAGGTTTATATCTGCTCATTTGAATACTTTATCACTGCACTGAGGCTTTTCAATTCACTTTCGTCTGACCACTCTCTGTATGAGGAGGAAGCTGGGACTCTCCGTTGATTGTTTTGTCTATGTTTTTACCTTACACAGAAGAATGAATCTCTCTAGTTGTCTCTCCCAATAAAAATAATTGTTTAAAATGG

Function

NR:

description
membrane primary amine oxidase-like

GO: NA

KEGG:

id description
K00276 AOC3, AOC2, tynA; primary-amine oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557930.2 True 2921 mRNA 0.46 4 41564055 41567425

Neighbor

gene id symbol gene type direction distance location
LOC110486384 LOC106601296 coding downstream 5205 41554989 ~ 41558850 (-)
LOC110486383 myst2 coding downstream 10464 41541160 ~ 41553591 (-)
LOC110486379 LOC106601273 coding downstream 46465 41479727 ~ 41517590 (-)
col5a3a LOC106607203 coding downstream 201070 41282052 ~ 41362985 (-)
LOC110485175 LOC106601278 coding downstream 313712 41132949 ~ 41250343 (-)
LOC110486387 LOC106601269 coding upstream 6024 41573449 ~ 41581577 (-)
LOC110487540 NA coding upstream 80706 41648131 ~ 41650433 (-)
LOC110486390 LOC106607189 coding upstream 98086 41665511 ~ 41675898 (-)
rl23 rl23 coding upstream 162614 41730039 ~ 41732989 (-)
LOC110486396 LOC106601258 coding upstream 210924 41776509 ~ 41857626 (-)
G1175419 NA non-coding downstream 1370 41562485 ~ 41562685 (-)
G1175407 NA non-coding downstream 28184 41534277 ~ 41535871 (-)
G1175405 NA non-coding downstream 39500 41524076 ~ 41524555 (-)
G1175368 NA non-coding downstream 109394 41453425 ~ 41454661 (-)
G1175422 NA non-coding upstream 302 41567727 ~ 41568036 (-)
G1175440 NA non-coding upstream 37444 41604869 ~ 41605088 (-)
G1175441 NA non-coding upstream 38736 41606161 ~ 41606379 (-)
G1175452 NA non-coding upstream 52704 41620129 ~ 41620363 (-)
G1175469 NA non-coding upstream 76915 41644340 ~ 41644602 (-)
LOC110486364 LOC106601288 other downstream 729419 40831402 ~ 40843483 (-)
G1174741 NA other downstream 1106374 40456895 ~ 40457681 (-)
G1174658 NA other downstream 1247196 40316118 ~ 40316859 (-)
G1173645 NA other downstream 1639096 39923922 ~ 39924959 (-)
G1175904 LOC106607178 other upstream 429889 41997314 ~ 41997637 (-)
G1175906 NA other upstream 431927 41999352 ~ 42000091 (-)
G1176164 NA other upstream 760619 42328044 ~ 42328572 (-)
LOC110486413 rbx1 other upstream 885734 42453094 ~ 42456995 (-)
LOC110487542 LOC106607166 other upstream 902277 42469256 ~ 42477053 (-)

Expression


Co-expression Network