ndufa6 (ndua6)


Basic Information

Item Value
gene id ndufa6
gene name ndua6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 42990701 ~ 42993308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558064.2
TAGGTGGCAGCACGAATTCGTTTCAAATCCGAATTATTAACGATGTTAACCAGAGAAGAAGATAAAAGAAACAAACATGGCGTCCAGTGCAGCGACCCGGACAGCCGCTGGTGCTGCTAAAGTTGTCAAACCGATTTTCAGCAGGGATCTGGATGAAGCCAAGCGCCGAGTTCGGGAACTGTATCGTGCCTGGTACAGAGAGGTTCCAAACACAGTGACTACCTTCCAGCTGGACATCACAGCTCGCCAGGGAACAGACAAAGTGAGGGAGATGTTTGACAGGAACAAGCACGTCAATGACCCCCGTGTGATTGACATGCTTGTCATTAAGGGTAAGATGGAGCTGCAGGAGACCATCAATGTCTGGAAGCAGAAGACCCACATTATGCGCTATTTCCATGAGACGGAGGTACCACGCCCTGCAGACTTTCTGTCCAGATTTTATGTTGGACATGACAATTGAACTGCTCCCTGTACTTTCCACCCTGTTTTGTCCAGTGTAACAGAGGCTTCCCCTTATTGAACTGTAAATATACACATGATACCCAA

Function

NR:

description
NADH dehydrogenase 1 alpha subcomplex subunit 6

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0070469 respirasome cellular_component

KEGG:

id description
K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558064.2 True 549 mRNA 0.48 3 42990701 42993308

Neighbor

gene id symbol gene type direction distance location
LOC110486447 LOC106607129 coding upstream 225 42963102 ~ 42990476 (+)
nol12 LOC106607131 coding upstream 37395 42951079 ~ 42953306 (+)
srebf2 LOC106607132 coding upstream 42115 42932944 ~ 42948586 (+)
LOC110486442 LOC106607134 coding upstream 58722 42922020 ~ 42931979 (+)
LOC110486443 cc134 coding upstream 68822 42911916 ~ 42921879 (+)
LOC118938458 NA coding downstream 7402 43000710 ~ 43001284 (+)
LOC110486450 LOC100380702 coding downstream 18661 43011969 ~ 43017789 (+)
rrp7a zg14 coding downstream 25218 43018526 ~ 43020625 (+)
wbp2nl wbp2 coding downstream 33706 43027014 ~ 43032851 (+)
LOC110486456 LOC106601209 coding downstream 74177 43067485 ~ 43079588 (+)
G1176460 NA non-coding upstream 25654 42964803 ~ 42965047 (+)
G1176459 NA non-coding upstream 26163 42964333 ~ 42964538 (+)
G1176458 NA non-coding upstream 28974 42961488 ~ 42961727 (+)
G1176412 NA non-coding upstream 116233 42874185 ~ 42874468 (+)
G1176475 NA non-coding downstream 16007 43009315 ~ 43009626 (+)
G1176482 NA non-coding downstream 30724 43024032 ~ 43024434 (+)
G1176484 NA non-coding downstream 32455 43025763 ~ 43026230 (+)
G1176486 LOC106601210 non-coding downstream 40895 43034203 ~ 43035231 (+)
G1176504 NA non-coding downstream 58002 43051310 ~ 43051602 (+)
LOC110486430 LOC106601228 other upstream 260590 42725254 ~ 42734581 (+)
G1176278 LOC106607164 other upstream 506181 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 698835 42289091 ~ 42291866 (+)
G1175667 NA other upstream 1064045 41926275 ~ 41926656 (+)
LOC110485182 LOC106607095 other downstream 265867 43259175 ~ 43265600 (+)
LOC110486464 mgp other downstream 404441 43397744 ~ 43402308 (+)
LOC110486465 bglap other downstream 412860 43406158 ~ 43407943 (+)
G1177750 NA other downstream 1125570 44118878 ~ 44121922 (+)
LOC110486491 LOC106607082 other downstream 1181076 44174050 ~ 44211083 (+)

Expression


Co-expression Network