Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938568 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 43277623 ~ 43277680 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118938568 | True | 58 | mRNA | 0.43 | 1 | 43277623 | 43277680 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485182 | LOC106607095 | coding | upstream | 12129 | 43259175 ~ 43265600 (+) |
| tcf20 | LOC106601207 | coding | upstream | 24662 | 43227829 ~ 43252961 (+) |
| LOC110485181 | grin2b | coding | upstream | 58223 | 43079791 ~ 43219400 (+) |
| LOC110486456 | LOC106601209 | coding | upstream | 198035 | 43067485 ~ 43079588 (+) |
| wbp2nl | wbp2 | coding | upstream | 244772 | 43027014 ~ 43032851 (+) |
| LOC110486461 | LOC106607100 | coding | downstream | 30688 | 43308368 ~ 43347397 (+) |
| LOC110486464 | mgp | coding | downstream | 120064 | 43397744 ~ 43402308 (+) |
| LOC110486465 | bglap | coding | downstream | 128478 | 43406158 ~ 43407943 (+) |
| LOC110486466 | LOC106601201 | coding | downstream | 131053 | 43408733 ~ 43415132 (+) |
| ddx47 | LOC106607097 | coding | downstream | 137727 | 43415407 ~ 43418459 (+) |
| G1176607 | NA | non-coding | upstream | 4369 | 43273035 ~ 43273254 (+) |
| G1176596 | NA | non-coding | upstream | 10349 | 43265773 ~ 43267274 (+) |
| G1176587 | NA | non-coding | upstream | 20689 | 43256690 ~ 43256934 (+) |
| G1176586 | NA | non-coding | upstream | 20976 | 43256345 ~ 43256647 (+) |
| G1176612 | NA | non-coding | downstream | 3233 | 43280913 ~ 43281240 (+) |
| G1176617 | NA | non-coding | downstream | 6826 | 43284506 ~ 43284777 (+) |
| G1176601 | NA | non-coding | downstream | 8078 | 43285758 ~ 43296728 (+) |
| G1176622 | NA | non-coding | downstream | 27134 | 43304814 ~ 43305035 (+) |
| G1176628 | NA | non-coding | downstream | 48407 | 43326087 ~ 43326608 (+) |
| LOC110486447 | LOC106607129 | other | upstream | 305412 | 42963102 ~ 42990476 (+) |
| LOC110486430 | LOC106601228 | other | upstream | 547512 | 42725254 ~ 42734581 (+) |
| G1176278 | LOC106607164 | other | upstream | 793103 | 42482377 ~ 42484520 (+) |
| G1176084 | LOC106607173 | other | upstream | 985757 | 42289091 ~ 42291866 (+) |
| G1177750 | NA | other | downstream | 841198 | 44118878 ~ 44121922 (+) |
| LOC110486491 | LOC106607082 | other | downstream | 896704 | 44174050 ~ 44211083 (+) |
| G1178363 | NA | other | downstream | 1390388 | 44668068 ~ 44668459 (+) |
