LOC118938304 (LOC106596055)


Basic Information

Item Value
gene id LOC118938304
gene name LOC106596055
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43499800 ~ 43500729 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035557.1
CAAACCTGCAAACTCCCCGAAAGGCACCCTTGATAGACCAGAGACACCAGCCAGACAATATCTACAAATTGTCAAGTGTGATCTCACATCTGGGAGACAACATGTATACAGGCCACTacatcagtgatgttttggacAGCCGTGGCAGTGGGTGGCTCTGCCTGGATGACACACATGTCTTGAGGACAGATGAGGCCACTGTGCTGAAGGCGATTTCACAGACTGCCTACATCCTGTTCTATGTCTGCAGGTAAGGCTCTAGGCCACAAATTTGAGAAGAATGTCACAAATGGAGTCAATGACGACAATCAGTCCCTTTCACCTGTAATCCCTCTGTATGTGTTATTTTTCAGACATTGTATGTACATGTAAGATCTCCCTGTCATT

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035557.1 True 387 mRNA 0.46 3 43499800 43500729

Neighbor

gene id symbol gene type direction distance location
LOC118938302 LOC106591500 coding downstream 10207 43487102 ~ 43489593 (-)
LOC118938297 LOC106596055 coding downstream 12700 43485682 ~ 43487100 (-)
LOC110487544 NA coding downstream 137561 43355729 ~ 43362239 (-)
LOC110486463 LOC106607099 coding downstream 146652 43346778 ~ 43353148 (-)
LOC110486460 LOC106607104 coding downstream 201951 43285756 ~ 43297849 (-)
LOC118938072 LOC106595933 coding upstream 85 43500814 ~ 43502295 (-)
LOC110486469 LOC106591500 coding upstream 14693 43515422 ~ 43518265 (-)
LOC118938073 LOC106595933 coding upstream 33888 43534617 ~ 43535764 (-)
LOC118938075 LOC106595933 coding upstream 53773 43553375 ~ 43622157 (-)
LOC118938296 LOC106591500 coding upstream 55375 43556104 ~ 43558397 (-)
G1177509 LOC106601199 non-coding downstream 26657 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 27559 43471406 ~ 43472241 (-)
G1177237 NA non-coding downstream 91429 43407998 ~ 43408371 (-)
G1177175 NA non-coding downstream 137532 43352501 ~ 43362354 (-)
G1177170 NA non-coding downstream 219160 43280439 ~ 43280640 (-)
LOC118938078 LOC106595933 non-coding upstream 81146 43581875 ~ 43642076 (-)
G1177553 NA non-coding upstream 108656 43609385 ~ 43624534 (-)
G1177552 NA non-coding upstream 114205 43601363 ~ 43647736 (-)
G1177561 NA non-coding upstream 160048 43660777 ~ 43689793 (-)
G1177238 LOC106607096 other downstream 84697 43414159 ~ 43415103 (-)
G1177047 NA other downstream 423447 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 450256 43039174 ~ 43049544 (-)
G1177027 NA other downstream 492042 43007379 ~ 43007758 (-)
G1177709 LOC106601291 other upstream 472810 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 476418 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 526583 44024053 ~ 44029014 (-)
G1178281 NA other upstream 962225 44462954 ~ 44463226 (-)

Expression


Co-expression Network