LOC118938072 (LOC106595933)


Basic Information

Item Value
gene id LOC118938072
gene name LOC106595933
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43500814 ~ 43502295 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939745.1
gtatgtatggatggatggatggatgaatggatataTATTGTCCTTCGTACACTCTTAGTGTCTCATATGATTTTTAAGATAAAACCACACCCAACTCAGCTTCTGATTAATACCAGAGATGATTTCCTGTCACAGTCAGGAATCAGTTGAATCATATTTGATCAGAAGTTAAAGTAGAAGCACAGAGCTAATCTGTGGCCAAGGTGAGAGAGTGAAACCTGAATGCATGCTCTTTGTCTCCCTCCACAGCTGCTTTGCCGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTTCAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGACGACAATGAACAGGTAAGATATTATTTGCTAAAAGACTCACTTAACAATAAACCTGGGACACGTGACAGTGTTTTTCCCCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCCGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGTTGGTTTACACTCTGTTTTGGGACATTGCACATTGA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939745.1 True 1001 mRNA 0.46 4 43500814 43502295

Neighbor

gene id symbol gene type direction distance location
LOC118938304 LOC106596055 coding downstream 85 43499800 ~ 43500729 (-)
LOC118938302 LOC106591500 coding downstream 11221 43487102 ~ 43489593 (-)
LOC118938297 LOC106596055 coding downstream 13714 43485682 ~ 43487100 (-)
LOC110487544 NA coding downstream 138575 43355729 ~ 43362239 (-)
LOC110486463 LOC106607099 coding downstream 147666 43346778 ~ 43353148 (-)
LOC110486469 LOC106591500 coding upstream 13127 43515422 ~ 43518265 (-)
LOC118938073 LOC106595933 coding upstream 32322 43534617 ~ 43535764 (-)
LOC118938075 LOC106595933 coding upstream 52207 43553375 ~ 43622157 (-)
LOC118938296 LOC106591500 coding upstream 53809 43556104 ~ 43558397 (-)
LOC118938303 LOC106596055 coding upstream 77793 43580088 ~ 43580855 (-)
G1177509 LOC106601199 non-coding downstream 27671 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 28573 43471406 ~ 43472241 (-)
G1177237 NA non-coding downstream 92443 43407998 ~ 43408371 (-)
G1177175 NA non-coding downstream 138546 43352501 ~ 43362354 (-)
G1177170 NA non-coding downstream 220174 43280439 ~ 43280640 (-)
LOC118938078 LOC106595933 non-coding upstream 79580 43581875 ~ 43642076 (-)
G1177553 NA non-coding upstream 107090 43609385 ~ 43624534 (-)
G1177552 NA non-coding upstream 112639 43601363 ~ 43647736 (-)
G1177561 NA non-coding upstream 158482 43660777 ~ 43689793 (-)
G1177238 LOC106607096 other downstream 85711 43414159 ~ 43415103 (-)
G1177047 NA other downstream 424461 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 451270 43039174 ~ 43049544 (-)
G1177027 NA other downstream 493056 43007379 ~ 43007758 (-)
G1177709 LOC106601291 other upstream 471244 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 474852 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 525017 44024053 ~ 44029014 (-)
G1178281 NA other upstream 960659 44462954 ~ 44463226 (-)

Expression


Co-expression Network