LOC118938296 (LOC106591500)


Basic Information

Item Value
gene id LOC118938296
gene name LOC106591500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43556104 ~ 43558397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941163.1
AAACAGTGTTCAAACAGACCGATTGGTGTTGAGCTACTGCTACTGAggcctctaccctgtctctcttcctccaggCCATTGGTCAGGTCTCGGGAAGCCATGGCTCGCCTTCCCAACCTGTTCAGCAAGAGTAGCACCCAGCTGGGGGAGCAGAGCTGCACAGGCGGGGGCGAAGACAACACCAAGCTCCtcggGTTGCCTAATATTGGCAACACCTGCTTCATGAACTCTGCTCTGCAGTGCCTGCTGGGGCTGCCAGCATTTTGCAGAGACATCCTGAGACAGCAGAATATCTGgagttcctccccctcctctaaacTGCTATGCTGCTTTGCCGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTTCAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGACGACAATGAACAGGTAAGATATTATTTGCTAAAAGACTCACTTAACAATAAACCTGGGACACGTGACAGTGTTTTTCCTCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCCGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGGTAACAGCTGTCATTTGTATACGGTGTACCTTGATGTCATCATCACATTTGTGAGGAGGTTTAATGTCAGCATAATATGCAGGATACAGAGGTAAAGCATTAAGATAGTGTGTAGAGGATCAAAAGGTTTGTGTTGGATAGCTGATGCATTTCT

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941163.1 True 883 mRNA 0.48 3 43556104 43558397

Neighbor

gene id symbol gene type direction distance location
LOC118938073 LOC106595933 coding downstream 20340 43534617 ~ 43535764 (-)
LOC110486469 LOC106591500 coding downstream 37839 43515422 ~ 43518265 (-)
LOC118938072 LOC106595933 coding downstream 53809 43500814 ~ 43502295 (-)
LOC118938304 LOC106596055 coding downstream 55375 43499800 ~ 43500729 (-)
LOC118938302 LOC106591500 coding downstream 66511 43487102 ~ 43489593 (-)
LOC118938303 LOC106596055 coding upstream 21691 43580088 ~ 43580855 (-)
LOC118938076 LOC106591500 coding upstream 35477 43593874 ~ 43596247 (-)
LOC118938301 LOC106591500 coding upstream 49852 43608249 ~ 43610913 (-)
LOC118938077 LOC106595933 coding upstream 64615 43623012 ~ 43624535 (-)
LOC118938078 LOC106595933 coding upstream 82114 43581875 ~ 43642076 (-)
G1177509 LOC106601199 non-coding downstream 82961 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 83863 43471406 ~ 43472241 (-)
G1177237 NA non-coding downstream 147733 43407998 ~ 43408371 (-)
G1177175 NA non-coding downstream 193836 43352501 ~ 43362354 (-)
G1177170 NA non-coding downstream 275464 43280439 ~ 43280640 (-)
G1177553 NA non-coding upstream 50988 43609385 ~ 43624534 (-)
G1177552 NA non-coding upstream 56537 43601363 ~ 43647736 (-)
G1177561 NA non-coding upstream 102380 43660777 ~ 43689793 (-)
G1177564 LOC106601165 non-coding upstream 114937 43673334 ~ 43733093 (-)
G1177238 LOC106607096 other downstream 141001 43414159 ~ 43415103 (-)
G1177047 NA other downstream 479751 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 506560 43039174 ~ 43049544 (-)
G1177027 NA other downstream 548346 43007379 ~ 43007758 (-)
G1177709 LOC106601291 other upstream 415142 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 418750 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 468915 44024053 ~ 44029014 (-)
G1178281 NA other upstream 904557 44462954 ~ 44463226 (-)

Expression


Co-expression Network