LOC118938076 (LOC106591500)


Basic Information

Item Value
gene id LOC118938076
gene name LOC106591500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43593874 ~ 43596247 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939750.1
GCCAGGCTTTCTGGAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTTCAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGACGACAATGAACAGGTAAGATATTATTTGCTAAAAGACTCACTTAACAATAAACCTGGGACACGGGACAGTGTTTTTCCCCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTTCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCTGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGGCAAGCTCCCTGGGGAAAAACAACATGGACAACAAACCTGCAAACTCCCCGAAAGGCACCCTTGATAGACCAGCTTCAAATTCCTCTGaccagctagagaaaccagcTGACAGTGAGGAAAAGCAGCAGGCAGCCGctgtgAGACACCAGCCAGAAAATATCTACAAATTGTCAAGTGTGATCTCACATCTGGGAGACAACATGTATACAGGCCACTacatcagtgatgttttggacAGCCGTGGCAGTGGGTGGCTCTGCCTGGATGACGCACATGTCTTGAGGACAGATGAGGCCACTGTGCTGAAGGCGATTGCACAGACTGCCTACATCCTGTTCTATGTCTGCAGTGGAGCAGGTGACGGAGACCAGGCCCCGCACTACCAGGAGAAGGATCAGGAGAACCCATCATTAAACTCAGGGAGATGCACAGCGCTCAGGGACCACCTGGAGTAG

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939750.1 True 1150 mRNA 0.50 9 43593874 43596247

Neighbor

gene id symbol gene type direction distance location
LOC118938303 LOC106596055 coding downstream 13019 43580088 ~ 43580855 (-)
LOC118938296 LOC106591500 coding downstream 35477 43556104 ~ 43558397 (-)
LOC118938075 LOC106595933 coding downstream 37531 43553375 ~ 43622157 (-)
LOC118938073 LOC106595933 coding downstream 58110 43534617 ~ 43535764 (-)
LOC110486469 LOC106591500 coding downstream 75609 43515422 ~ 43518265 (-)
LOC118938301 LOC106591500 coding upstream 12002 43608249 ~ 43610913 (-)
LOC118938077 LOC106595933 coding upstream 26765 43623012 ~ 43624535 (-)
LOC118938078 LOC106595933 coding upstream 44264 43581875 ~ 43642076 (-)
LOC118938552 LOC106591500 coding upstream 57162 43653409 ~ 43655613 (-)
LOC118938306 LOC106591500 coding upstream 70975 43667222 ~ 43670676 (-)
G1177513 NA non-coding downstream 31013 43480014 ~ 43562861 (-)
G1177509 LOC106601199 non-coding downstream 120731 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 121633 43471406 ~ 43472241 (-)
G1177237 NA non-coding downstream 185503 43407998 ~ 43408371 (-)
G1177175 NA non-coding downstream 231606 43352501 ~ 43362354 (-)
G1177553 NA non-coding upstream 13138 43609385 ~ 43624534 (-)
G1177552 NA non-coding upstream 18687 43601363 ~ 43647736 (-)
G1177561 NA non-coding upstream 64530 43660777 ~ 43689793 (-)
G1177564 LOC106601165 non-coding upstream 77087 43673334 ~ 43733093 (-)
G1177566 NA non-coding upstream 105322 43701569 ~ 43734921 (-)
G1177238 LOC106607096 other downstream 178771 43414159 ~ 43415103 (-)
G1177047 NA other downstream 517521 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 544330 43039174 ~ 43049544 (-)
G1177027 NA other downstream 586116 43007379 ~ 43007758 (-)
G1177709 LOC106601291 other upstream 377292 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 380900 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 431065 44024053 ~ 44029014 (-)
G1178281 NA other upstream 866707 44462954 ~ 44463226 (-)

Expression


Co-expression Network