LOC118938301 (LOC106591500)


Basic Information

Item Value
gene id LOC118938301
gene name LOC106591500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43608249 ~ 43610913 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035554.1
AAGCCATGGCTCGCCTTCCCAACCTGTTCAGCAAGAGTAGCACCCAGCTGGGGGAGCAGAGCTGCACAGGCGAGGGCGAAGACAACACCAAGCTCCtcggGTTGCCTAATATTGGCAACACCTGCTTCATGAACTCTGCTCTGCAGTGCCTGCTGGGGCTGCCAGCATTTTGCAGAGACATCCTGAGACAGCAGAATATCTGgagttcctccccctcctctaaacTGCTATGCTGCTTTGCCGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTTCAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGACGACAATGAACAGGTAAGATATTATTTGCTAAAAGACTCACTTAACAATAAACCTGGGACACGGGACAGTGTTTTTCCCCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCCGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGGTAACAGCTGTCATTTGTATACGGTGTACCTTGATGTCATCATCACATTTGTGAGGAGGTTTAATGTCAGCATAATATGCAGGATACAGAGGTAAAGCATTAAGATAGTGTGTAGAGGATCAAAAGGTTTGTGTTGGATAGCTGATGCATTTCTCTCCGTACTTCTGAAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGGCAAGCTCCCTGGGGAAAAACAACATGGACAACAAACCTGCAAACTCCCCGAAAGGCACCCTTGATAGACCAGG

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035554.1 True 1192 mRNA 0.49 6 43608249 43610913

Neighbor

gene id symbol gene type direction distance location
LOC118938076 LOC106591500 coding downstream 12002 43593874 ~ 43596247 (-)
LOC118938303 LOC106596055 coding downstream 27394 43580088 ~ 43580855 (-)
LOC118938296 LOC106591500 coding downstream 49852 43556104 ~ 43558397 (-)
LOC118938075 LOC106595933 coding downstream 51906 43553375 ~ 43622157 (-)
LOC118938073 LOC106595933 coding downstream 72485 43534617 ~ 43535764 (-)
LOC118938077 LOC106595933 coding upstream 12099 43623012 ~ 43624535 (-)
LOC118938078 LOC106595933 coding upstream 29598 43581875 ~ 43642076 (-)
LOC118938552 LOC106591500 coding upstream 42496 43653409 ~ 43655613 (-)
LOC118938306 LOC106591500 coding upstream 56309 43667222 ~ 43670676 (-)
LOC118938553 LOC106591500 coding upstream 69519 43680432 ~ 43683000 (-)
G1177513 NA non-coding downstream 45388 43480014 ~ 43562861 (-)
G1177509 LOC106601199 non-coding downstream 135106 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 136008 43471406 ~ 43472241 (-)
G1177237 NA non-coding downstream 199878 43407998 ~ 43408371 (-)
G1177175 NA non-coding downstream 245981 43352501 ~ 43362354 (-)
G1177552 NA non-coding upstream 4021 43601363 ~ 43647736 (-)
G1177561 NA non-coding upstream 49864 43660777 ~ 43689793 (-)
G1177564 LOC106601165 non-coding upstream 62421 43673334 ~ 43733093 (-)
G1177566 NA non-coding upstream 90656 43701569 ~ 43734921 (-)
G1177589 NA non-coding upstream 143210 43754123 ~ 43754439 (-)
G1177238 LOC106607096 other downstream 193146 43414159 ~ 43415103 (-)
G1177047 NA other downstream 531896 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 558705 43039174 ~ 43049544 (-)
G1177027 NA other downstream 600491 43007379 ~ 43007758 (-)
G1177709 LOC106601291 other upstream 362626 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 366234 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 416399 44024053 ~ 44029014 (-)
G1178281 NA other upstream 852041 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 872709 44467268 ~ 44545484 (-)

Expression


Co-expression Network