LOC118938077 (LOC106595933)


Basic Information

Item Value
gene id LOC118938077
gene name LOC106595933
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43623012 ~ 43624535 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939751.1
ATATATTGTCCTTCGTACACTCTTAGTGTCTCATATGATTTTTAAGATAAAACCACACCCAACTCAGCTTCTGATTAACACCAGAGATGATTTCCTGTCACAGTCAGGAATCAGTTGAATCATATTTGATCAGAGGCTAAAGTAGAAGCACAGAGCTAATCTGTGGCCAAGGTGAGAGAGTGAAACCTGAATGCATGCTCTTTGTCTCCCTCCACAGCTGCTTTGCCGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTACAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGACGACAATGAACAGGTAAGATATTATTTGCTAAAAGACTCACTTAACAATAAACCTGGGACACGTGACAGTGTTTTTCCCCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCCGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGTTGGTTTACACTCTGTTTTGGGACATTGCACATTGA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939751.1 True 969 mRNA 0.47 4 43623012 43624535

Neighbor

gene id symbol gene type direction distance location
LOC118938301 LOC106591500 coding downstream 12099 43608249 ~ 43610913 (-)
LOC118938076 LOC106591500 coding downstream 26765 43593874 ~ 43596247 (-)
LOC118938303 LOC106596055 coding downstream 42157 43580088 ~ 43580855 (-)
LOC118938296 LOC106591500 coding downstream 64615 43556104 ~ 43558397 (-)
LOC118938075 LOC106595933 coding downstream 66669 43553375 ~ 43622157 (-)
LOC118938078 LOC106595933 coding upstream 15976 43581875 ~ 43642076 (-)
LOC118938552 LOC106591500 coding upstream 28874 43653409 ~ 43655613 (-)
LOC118938306 LOC106591500 coding upstream 42687 43667222 ~ 43670676 (-)
LOC118938553 LOC106591500 coding upstream 55897 43680432 ~ 43683000 (-)
LOC118938308 LOC106591500 coding upstream 70465 43695000 ~ 43697608 (-)
G1177513 NA non-coding downstream 60151 43480014 ~ 43562861 (-)
G1177509 LOC106601199 non-coding downstream 149869 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 150771 43471406 ~ 43472241 (-)
G1177237 NA non-coding downstream 214641 43407998 ~ 43408371 (-)
G1177561 NA non-coding upstream 36242 43660777 ~ 43689793 (-)
G1177564 LOC106601165 non-coding upstream 48799 43673334 ~ 43733093 (-)
G1177566 NA non-coding upstream 77034 43701569 ~ 43734921 (-)
G1177589 NA non-coding upstream 129588 43754123 ~ 43754439 (-)
G1177608 NA non-coding upstream 198679 43823214 ~ 43871474 (-)
G1177552 NA other downstream 7004 43601363 ~ 43647736 (-)
G1177238 LOC106607096 other downstream 207909 43414159 ~ 43415103 (-)
G1177175 NA other downstream 260658 43352501 ~ 43362354 (-)
G1177047 NA other downstream 546659 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 573468 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 349004 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 352612 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 402777 44024053 ~ 44029014 (-)
G1178281 NA other upstream 838419 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 859087 44467268 ~ 44545484 (-)

Expression


Co-expression Network