LOC118938078 (LOC106595933)


Basic Information

Item Value
gene id LOC118938078
gene name LOC106595933
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43581875 ~ 43642076 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939753.1
tctctctctctctctatctatctcgctctctctctctctatctatttatCTATGTATGAATGtaggtatggatggatggatggatatatatTGTCCTTCGTACACTCAGTGTCTCATATGATTTTTAAGATAAAACCACACCCAACTCAGCTTCTGATTAATACCAGAGATGATTTCCTGTCACAGTCAGGAATCAGTTGAATCATATTTGATCAGAAGCTAAAGTAGAAGCACAGAGCTAATCTGTGGCCAAGGTGAGAGAGTGAAACCTGAATGCATGCTCTTTGTCTCCCTCCACAGCTGCTTTGCCGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTATTAATGCTAAGAACAAGGAAAATAAGAAAATCCTACAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGAAGACTATGAACAGGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCCGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGTTGGTTTACACTCTGTTTGGGGACATTGCACATTGA
>TU1342861
tctctctctctctatctatctcgctctctctctctctatctatttatCTATGTATGAATGtaggtatggatggatggatggatatatatTGTCCTTCGTACACTCAGTGTCTCATATGATTTTTAAGATAAAACCACACCCAACTCAGCTTCTGATTAACACCAGAGATGATTTCCTGTCACAGTCAGGAATCAGTTGAATCATATTTGATCAGAAGCTAAAGTAGAAGCACAGAGCTAATCTGTGGCCAAGGTGAGAGAGTGAAACCTGAATGCATGCTCTTTGTCTCCCTCCACAGCTGCTTTGCCGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTATTAATGCTAAGAACAAGGAAAATAAGAAAATCCTACAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGAAGACTATGAACAGGTAAGATATTATTTGCTAAAAGACTCACGTAACAATAAACCTGGGACACGTGACAGTGTTTTTCCTCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATAC

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939753.1 False 925 mRNA 0.47 5 43640511 43642076
TU1342861 True 645 lncRNA 0.42 2 43581875 43642074

Neighbor

gene id symbol gene type direction distance location
LOC118938077 LOC106595933 coding downstream 15976 43623012 ~ 43624535 (-)
LOC118938301 LOC106591500 coding downstream 29598 43608249 ~ 43610913 (-)
LOC118938076 LOC106591500 coding downstream 44264 43593874 ~ 43596247 (-)
LOC118938303 LOC106596055 coding downstream 59656 43580088 ~ 43580855 (-)
LOC118938296 LOC106591500 coding downstream 82114 43556104 ~ 43558397 (-)
LOC118938552 LOC106591500 coding upstream 11333 43653409 ~ 43655613 (-)
LOC118938306 LOC106591500 coding upstream 25146 43667222 ~ 43670676 (-)
LOC118938553 LOC106591500 coding upstream 38356 43680432 ~ 43683000 (-)
LOC118938308 LOC106591500 coding upstream 52924 43695000 ~ 43697608 (-)
LOC118938081 LOC106591500 coding upstream 85156 43727232 ~ 43728256 (-)
G1177553 NA non-coding downstream 15977 43609385 ~ 43624534 (-)
LOC118938075 LOC106595933 non-coding downstream 18354 43553375 ~ 43622157 (-)
G1177513 NA non-coding downstream 77650 43480014 ~ 43562861 (-)
G1177509 LOC106601199 non-coding downstream 167368 43472643 ~ 43473143 (-)
G1177507 NA non-coding downstream 168270 43471406 ~ 43472241 (-)
G1177561 NA non-coding upstream 18701 43660777 ~ 43689793 (-)
G1177564 LOC106601165 non-coding upstream 31258 43673334 ~ 43733093 (-)
G1177566 NA non-coding upstream 59493 43701569 ~ 43734921 (-)
G1177589 NA non-coding upstream 112047 43754123 ~ 43754439 (-)
G1177608 NA non-coding upstream 181138 43823214 ~ 43871474 (-)
G1177552 NA other downstream 24503 43601363 ~ 43647736 (-)
G1177238 LOC106607096 other downstream 225408 43414159 ~ 43415103 (-)
G1177175 NA other downstream 278157 43352501 ~ 43362354 (-)
G1177047 NA other downstream 564158 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 590967 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 331463 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 335071 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 385236 44024053 ~ 44029014 (-)
G1178281 NA other upstream 820878 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 841546 44467268 ~ 44545484 (-)
LOC118938073 LOC106595933 coding downstream 46111 43534617 ~ 43535764 (-)
LOC110486469 LOC106591500 coding downstream 63610 43515422 ~ 43518265 (-)
G1177237 NA non-coding downstream 173504 43407998 ~ 43408371 (-)
G1177027 NA other downstream 574117 43007379 ~ 43007758 (-)

Expression


Co-expression Network