LOC118938552 (LOC106591500)


Basic Information

Item Value
gene id LOC118938552
gene name LOC106591500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43653409 ~ 43655613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942622.1
GAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTTCAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGACGACAATGAACAGGTAAGATATTATTTGCTAAAAGACTCACTTAACAATAAACCTGGGACACGTGACAGTGTTTTTCCCCAGCTCTGTTTCAGTTGTAGTTGTTGATGTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTTCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCTGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGGCAAGCTCCCTGGGGAAAAACAACATGGACAACAAACCTGCAAACTCCCCGAAAGGCACCCTTGATAGACCAGAGACACCAGCCAGACAATATCTACAAATTGTCAAGTGTGATCTCACATCTGGGAGACAACATGTATACAGGCCACTacatcagtgatgttttggacAGCCGTGGCAGTGGGTGGCTCTGCCTGGATGACGCACATGTCTTGAGGACAGATGAGGCCACTGTGCTGAAGGCGATTGCACAGACTGCCTACATCCTGTTCTATGTCTGCAGGTAAGGCTCTAGGCCACAAATTTGAGAAGAATGTCACAAATGGAGTCAATGACGACAATCAGTCCCTTTCACCTGTAATCCCTCTGTATGTGTTATTTTTCAGACATTGTATGTACATGTAAGATCTCCCTGTC

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942622.1 True 1097 mRNA 0.48 7 43653409 43655613

Neighbor

gene id symbol gene type direction distance location
LOC118938078 LOC106595933 coding downstream 11333 43581875 ~ 43642076 (-)
LOC118938077 LOC106595933 coding downstream 28874 43623012 ~ 43624535 (-)
LOC118938301 LOC106591500 coding downstream 42496 43608249 ~ 43610913 (-)
LOC118938076 LOC106591500 coding downstream 57162 43593874 ~ 43596247 (-)
LOC118938303 LOC106596055 coding downstream 72554 43580088 ~ 43580855 (-)
LOC118938306 LOC106591500 coding upstream 11609 43667222 ~ 43670676 (-)
LOC118938553 LOC106591500 coding upstream 24819 43680432 ~ 43683000 (-)
LOC118938308 LOC106591500 coding upstream 39387 43695000 ~ 43697608 (-)
LOC118938081 LOC106591500 coding upstream 71619 43727232 ~ 43728256 (-)
LOC110486471 LOC106595933 coding upstream 91915 43747528 ~ 43750702 (-)
G1177552 NA non-coding downstream 5673 43601363 ~ 43647736 (-)
G1177553 NA non-coding downstream 28875 43609385 ~ 43624534 (-)
LOC118938075 LOC106595933 non-coding downstream 31252 43553375 ~ 43622157 (-)
G1177513 NA non-coding downstream 90548 43480014 ~ 43562861 (-)
G1177561 NA non-coding upstream 5164 43660777 ~ 43689793 (-)
G1177564 LOC106601165 non-coding upstream 17721 43673334 ~ 43733093 (-)
G1177566 NA non-coding upstream 45956 43701569 ~ 43734921 (-)
G1177589 NA non-coding upstream 98510 43754123 ~ 43754439 (-)
G1177608 NA non-coding upstream 167601 43823214 ~ 43871474 (-)
G1177238 LOC106607096 other downstream 238306 43414159 ~ 43415103 (-)
G1177175 NA other downstream 291055 43352501 ~ 43362354 (-)
G1177047 NA other downstream 577056 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 603865 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 317926 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 321534 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 371699 44024053 ~ 44029014 (-)
G1178281 NA other upstream 807341 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 828009 44467268 ~ 44545484 (-)

Expression


Co-expression Network