LOC118938081 (LOC106591500)


Basic Information

Item Value
gene id LOC118938081
gene name LOC106591500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43727232 ~ 43728256 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939754.1
GTATTTTCTGCttctttcccattcttctcttagGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCTGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTATGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCGACTGGGAGCCAAAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGTTGGTTTACACTCTGTTTGGGGACATTGCACATTGA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939754.1 True 519 mRNA 0.51 4 43727232 43728256

Neighbor

gene id symbol gene type direction distance location
LOC118938308 LOC106591500 coding downstream 29624 43695000 ~ 43697608 (-)
LOC118938553 LOC106591500 coding downstream 44232 43680432 ~ 43683000 (-)
LOC118938306 LOC106591500 coding downstream 56556 43667222 ~ 43670676 (-)
LOC118938552 LOC106591500 coding downstream 71619 43653409 ~ 43655613 (-)
LOC118938078 LOC106595933 coding downstream 85156 43581875 ~ 43642076 (-)
LOC110486471 LOC106595933 coding upstream 19272 43747528 ~ 43750702 (-)
LOC118938309 LOC106601194 coding upstream 23874 43752130 ~ 43753303 (-)
LOC110486474 LOC106601192 coding upstream 36711 43764967 ~ 43948465 (-)
zgc:158403 LOC106601368 coding upstream 250528 43977147 ~ 43992248 (-)
tspan35 LOC106601289 coding upstream 270196 43998452 ~ 44010679 (-)
G1177561 NA non-coding downstream 37439 43660777 ~ 43689793 (-)
G1177552 NA non-coding downstream 79496 43601363 ~ 43647736 (-)
G1177553 NA non-coding downstream 102698 43609385 ~ 43624534 (-)
LOC118938075 LOC106595933 non-coding downstream 105075 43553375 ~ 43622157 (-)
G1177589 NA non-coding upstream 25867 43754123 ~ 43754439 (-)
G1177608 NA non-coding upstream 94958 43823214 ~ 43871474 (-)
G1177614 NA non-coding upstream 105194 43833450 ~ 43865258 (-)
G1177633 NA non-coding upstream 107302 43835558 ~ 43836787 (-)
G1177634 NA non-coding upstream 130346 43858602 ~ 43864202 (-)
G1177238 LOC106607096 other downstream 312129 43414159 ~ 43415103 (-)
G1177175 NA other downstream 364878 43352501 ~ 43362354 (-)
G1177047 NA other downstream 650879 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 677688 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 245283 43973539 ~ 43974057 (-)
epor LOC106601362 other upstream 299056 44024053 ~ 44029014 (-)
G1178281 NA other upstream 734698 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 755366 44467268 ~ 44545484 (-)

Expression


Co-expression Network