LOC110486471 (LOC106595933)


Basic Information

Item Value
gene id LOC110486471
gene name LOC106595933
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43747528 ~ 43750702 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942624.1
TCTTAGTGCCTCATATGATTTTTAAGATAAAACCACACCCAACTCAGCTTCTGATTAACACCAGAGATGATTTCCTGTCACAGTCAGGAATCAGTTGAATCATATTTGATCAGAGGCTAAAGTAGAAGCACAGAGCTAATCTGTGGCCAAGGTGAGAGAGTGAAACCTGAATGCATGCTCTTTGTCTCCCTCCACAGCTGCTTTGCTGAGTTACATCAGGCCAGGCTTTCTGGAGGCACTGTTAATGCTAAGAACAAGGAAAATAAGAAAATCCTTCAAACAGTCAAGCGCTGTCTTTCCGTTGTCAATGAGGACTATGAGGAAGACTATGAACAGGATGCCCATGAATGTGTGTTGCTCCTCCTCTTTCAGCTGAAGGAGGAGGGTATGGCATTAAAGGGCTCACCAGAGCCATACACCTGCCCCGTGAAGCAGTTAGAATTCAAGCTGAAGACTTCCCGTACCTGCACCAGCTGTGGAGTTATAGTGTATGGTCAGGAGGATTACAATCACTTGTCCCTGAGCCTGAGCCATTACCTGCCACACAGCCTGGACCTCTACTTTAAGCCATCTGCGTTAGAGTGTGCATGCAGGGTGTGCTCAGGCAGCATGGCATCTGTGACTAGGCACTTCCTCACGCTGCCCCGGGTCCTAATGCTTCATATCAAGCGATTTACTGCAGGCAACTGGGAGCCAGAGAAGGTGGATGATCCCATGTCCATCCCTGCAGAAATAACCCTCCCAGCCGTATGTGGGAAGACAGCCCATGTCCAGTATGGAGCCAGGGCAAGCTCCCTGGGGAAAAACAACATGGACAACACACCTGCAAACTCCCCGAAAGGCACCCTTGATAGACCAGagACACCAGCCAGACAATATCTACAAATTGTCAAGTGTGATCTCACATCTGGGAGACAACATGTATACAGGCCACTacatcagtgatgttttggacAGCCGTGGCAGTGGGTGGCTCTGCCTGGATGACGCACATGTCTTGAGGACAGATGAGGCCACTGTGCTGAAGGCAATTGCACAGACTGCCTACATCCTGTTCTATGTCTGCAGtggagcaggtgaaGGAGACCAGGCACCTCACTACCAGGAGAAGCACCAGGAGAACCCATCATTAAACTCAGGGAGAGGCACAGCACTCAGGGACCACCTGGAGTAGCACCTACCACACACCAAGAAACATCAGATGAATCGAATTAggctgccctacaccaccatcaactGCCTTAGAATACCATAAAGCTGCTCTAGACCACCATCAGTCTACCCTActccaccatcaagctgccctactccaccatcaagctgccctacaccaccatcaagctgccctacaccaccatcaagc

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942624.1 True 1363 mRNA 0.50 9 43747528 43750702

Neighbor

gene id symbol gene type direction distance location
LOC118938081 LOC106591500 coding downstream 19272 43727232 ~ 43728256 (-)
LOC118938308 LOC106591500 coding downstream 49920 43695000 ~ 43697608 (-)
LOC118938553 LOC106591500 coding downstream 64528 43680432 ~ 43683000 (-)
LOC118938306 LOC106591500 coding downstream 76852 43667222 ~ 43670676 (-)
LOC118938552 LOC106591500 coding downstream 91915 43653409 ~ 43655613 (-)
LOC118938309 LOC106601194 coding upstream 1428 43752130 ~ 43753303 (-)
LOC110486474 LOC106601192 coding upstream 14265 43764967 ~ 43948465 (-)
zgc:158403 LOC106601368 coding upstream 228082 43977147 ~ 43992248 (-)
tspan35 LOC106601289 coding upstream 247750 43998452 ~ 44010679 (-)
LOC110486478 LOC106601191 coding upstream 265888 44016590 ~ 44021722 (-)
G1177566 NA non-coding downstream 12607 43701569 ~ 43734921 (-)
G1177564 LOC106601165 non-coding downstream 14435 43673334 ~ 43733093 (-)
G1177561 NA non-coding downstream 57735 43660777 ~ 43689793 (-)
G1177552 NA non-coding downstream 99792 43601363 ~ 43647736 (-)
LOC118938078 LOC106595933 non-coding downstream 105454 43581875 ~ 43642076 (-)
G1177589 NA non-coding upstream 3421 43754123 ~ 43754439 (-)
G1177608 NA non-coding upstream 72512 43823214 ~ 43871474 (-)
G1177614 NA non-coding upstream 82748 43833450 ~ 43865258 (-)
G1177633 NA non-coding upstream 84856 43835558 ~ 43836787 (-)
G1177634 NA non-coding upstream 107900 43858602 ~ 43864202 (-)
G1177238 LOC106607096 other downstream 332425 43414159 ~ 43415103 (-)
G1177175 NA other downstream 385174 43352501 ~ 43362354 (-)
G1177047 NA other downstream 671175 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 697984 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 222837 43973539 ~ 43974057 (-)
epor LOC106601362 other upstream 276610 44024053 ~ 44029014 (-)
G1178281 NA other upstream 712252 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 732920 44467268 ~ 44545484 (-)

Expression


Co-expression Network