LOC118938309 (LOC106601194)


Basic Information

Item Value
gene id LOC118938309
gene name LOC106601194
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43752130 ~ 43753303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941190.1
tatgtctgtgtgtctttacagAGATCTTATGAGCTctgaggtcaaagaggtgggggcAGTTGTTCCACAGACAAAGAGAATGGTACCCCTATTTGCTGGCATCGCAGaggcCTCCATTGACCTGAGGACTTCCTCTGTCTCCTTGGAGAGgCCATTGGTCAGGTCTCGGGAAGCCATTGCTCGCCTCCCCAACCTGTTCAGCAAGAGTAGCACCCAGCTGGGGGAGCAGAGCTGCACAGACGAGGGTGAAGACAACACCAAGCTCCtcggGTTGCCTAATATAGGCAACACCTGCTTCATGAACTCTGCTCTGCAGTGCCTGCTGGGGCTGCCAGCATTTTGCAGAGACATTCTGAGACAGCAGAATATCTGgagttcctccccctcctctaaacTGCTATGGTATACAGCCTCGCTCTCaccctcctgtcccacctgtaCACACACTGACCCACCCACCTAGACGCTTATAGTTACAGTACACAAGTTCCGCCTCAATGtatgtgtcagtggaggctgctgaggggaggacggctcgtaATGATGTCTGAAATGGAGCAAAtgtaatggcatcaaacacatggaaaccatatgtttgatgtattt

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941190.1 True 606 mRNA 0.52 4 43752130 43753303

Neighbor

gene id symbol gene type direction distance location
LOC110486471 LOC106595933 coding downstream 1428 43747528 ~ 43750702 (-)
LOC118938081 LOC106591500 coding downstream 23874 43727232 ~ 43728256 (-)
LOC118938308 LOC106591500 coding downstream 54522 43695000 ~ 43697608 (-)
LOC118938553 LOC106591500 coding downstream 69130 43680432 ~ 43683000 (-)
LOC118938306 LOC106591500 coding downstream 81454 43667222 ~ 43670676 (-)
LOC110486474 LOC106601192 coding upstream 11664 43764967 ~ 43948465 (-)
zgc:158403 LOC106601368 coding upstream 225481 43977147 ~ 43992248 (-)
tspan35 LOC106601289 coding upstream 245149 43998452 ~ 44010679 (-)
LOC110486478 LOC106601191 coding upstream 263287 44016590 ~ 44021722 (-)
epor LOC106601362 coding upstream 270750 44024053 ~ 44029014 (-)
G1177566 NA non-coding downstream 17209 43701569 ~ 43734921 (-)
G1177564 LOC106601165 non-coding downstream 19037 43673334 ~ 43733093 (-)
G1177561 NA non-coding downstream 62337 43660777 ~ 43689793 (-)
G1177552 NA non-coding downstream 104394 43601363 ~ 43647736 (-)
G1177553 NA non-coding downstream 127596 43609385 ~ 43624534 (-)
G1177589 NA non-coding upstream 820 43754123 ~ 43754439 (-)
G1177608 NA non-coding upstream 69911 43823214 ~ 43871474 (-)
G1177614 NA non-coding upstream 80147 43833450 ~ 43865258 (-)
G1177633 NA non-coding upstream 82255 43835558 ~ 43836787 (-)
G1177634 NA non-coding upstream 105299 43858602 ~ 43864202 (-)
G1177238 LOC106607096 other downstream 337027 43414159 ~ 43415103 (-)
G1177175 NA other downstream 389776 43352501 ~ 43362354 (-)
G1177047 NA other downstream 675777 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 702586 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 220236 43973539 ~ 43974057 (-)
G1178281 NA other upstream 709651 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 730319 44467268 ~ 44545484 (-)

Expression


Co-expression Network