Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938604 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45023197 ~ 45023294 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035812.1 | True | 98 | mRNA | 0.54 | 1 | 45023197 | 45023294 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135849 | LOC106607045 | coding | upstream | 7827 | 45001558 ~ 45015370 (+) |
| LOC110486526 | smarca4 | coding | upstream | 27070 | 44967368 ~ 44996127 (+) |
| LOC110486523 | LOC106607042 | coding | upstream | 67197 | 44944449 ~ 44956000 (+) |
| LOC110485188 | LOC106601310 | coding | upstream | 79246 | 44878675 ~ 44943951 (+) |
| LOC110486520 | LOC106607037 | coding | upstream | 176189 | 44845151 ~ 44847008 (+) |
| LOC110486529 | LOC106607046 | coding | downstream | 2895 | 45026189 ~ 45028620 (+) |
| zgc:162612 | LOC106607050 | coding | downstream | 88349 | 45111643 ~ 45115147 (+) |
| LOC110486534 | NA | coding | downstream | 112386 | 45135680 ~ 45140940 (+) |
| hmox1a | LOC106607056 | coding | downstream | 128788 | 45152082 ~ 45154732 (+) |
| LOC110486541 | LOC106607062 | coding | downstream | 200175 | 45223469 ~ 45268420 (+) |
| G1178536 | NA | non-coding | upstream | 5270 | 45017677 ~ 45017927 (+) |
| G1178465 | NA | non-coding | upstream | 57705 | 44964021 ~ 44965492 (+) |
| G1178457 | yo84 | non-coding | upstream | 61433 | 44960089 ~ 44961764 (+) |
| G1178511 | NA | non-coding | upstream | 108357 | 44914608 ~ 44914840 (+) |
| G1178508 | NA | non-coding | upstream | 110204 | 44912785 ~ 44912993 (+) |
| G1178541 | NA | non-coding | downstream | 12381 | 45035675 ~ 45035971 (+) |
| G1178549 | NA | non-coding | downstream | 21657 | 45044951 ~ 45045202 (+) |
| G1178554 | NA | non-coding | downstream | 27870 | 45051164 ~ 45051364 (+) |
| G1178555 | NA | non-coding | downstream | 43104 | 45066398 ~ 45101821 (+) |
| G1178587 | il-8 | non-coding | downstream | 61969 | 45085263 ~ 45087208 (+) |
| G1178425 | NA | other | upstream | 159014 | 44859869 ~ 44864183 (+) |
| G1178363 | NA | other | upstream | 354738 | 44668068 ~ 44668459 (+) |
| LOC110486491 | LOC106607082 | other | upstream | 817627 | 44174050 ~ 44211083 (+) |
| G1179156 | NA | other | downstream | 289036 | 45312330 ~ 45313033 (+) |
| G1179362 | NA | other | downstream | 439294 | 45462588 ~ 45462943 (+) |
| LOC110485192 | LOC106601391 | other | downstream | 506142 | 45529398 ~ 45554103 (+) |
| LOC118936304 | LOC106601427 | other | downstream | 1150734 | 46173911 ~ 46176562 (+) |
| G1180047 | NA | other | downstream | 1215850 | 46239144 ~ 46273601 (+) |
