LOC110486532 (LOC106607051)


Basic Information

Item Value
gene id LOC110486532
gene name LOC106607051
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45133029 ~ 45135645 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558206.2
CACACGGTACAGACTGATCCTTCTTCTAATGAGTCAGGACGTAGGCACGAGGAAGTTGACTAGCGTTCATACTAAATACGGCAATAATATCTGGCAATATCTCACAATCAAGAGATGGCGTCAGGTCCCCCACAAACAGAGCTGAGGCTGGTTCTGCTCGGCGGGACAAGAGCAGGACAGAGTGCAGCTGGAAACGCCATACTGGGCCACCAGGCTTTCCTTACCCAGACTGCCAGTGAGCCAGCTGTCACTCAGGAATGTGAGAAGCACAGAGGAATCATTGCAGGGAGATGGGTATCAGTAGTAGTTGCCCAAGACTGGTTCTGCTCAGAGCGCCCCCCGGAGGAGGTGAGGCACCATGTCTCCTCTTGCGTGGCCCTGTCGGCCCCGGGGCCTCATGGCTTCCTGCTGTGTGTCCCTGTGGACCGGCCGGCTGACATGGAGCTGCGGGCCCTGGAGGCCCTAGAGAAGGTTTTTGGCCCCACTGCAGTCTGTGGACACACCCTGGTCCTCTTCACCCACACAGACCAGATGGTTCTGGGACAACAGCTGGACGAGTACATCACCACCAGACGCAAAGACCTACTGGAGCTGGTGGTGATGTGTGGAGACCGCTATCACTCtctggagaggaggagtagaggagagaaggatgagaggaagAGTGTGGAAGAGCTGCTGGAGAAGGTTGAACAGACTGTAAAAGAGAGCGGGGTGGAGTTCTACAGCTGCCCCCTCTACCAGGAGGCTGAGGCCAGGGTGAGAGAGAAGCAGGCAGAGATAGTGTggcagagaagagggggagaggagctaGATGAAGAGGTGCCCTCCTCAGCCTCACCTCCAGAGCAAGAGCTAGATGATGAAGAGATGGCAAGAGTtagggaggaggcagagaggagtgtGCACAACCTGAACATAGACACCGAGGGTattacctctctttctcctgcctcctcctctccatcatttCTCTCATCCTTGTGGCAGGGATTGACAGGGTGGCTGAGGAGGCTGCCCAAGATGCTGAGGATGGAGTCTCTGCTGGGGGCTTTCGTTGGCCTGTTCGTAGGTGGGCCCGTTGGGCGGATGCTGGGGGCCACTGTGGGCTCAGTAGCCACTGAAGTGGGGAGAAGGAAGACCCCGAAGACAGAAAAAACCAAATAATGGCAATGGGATACATATCTCCAGTTATTAAcattaaagggacatttcaccatttttcaacttcatattcatcatcttcaGCACCAACACAATATCAACATATGTGTAAATTGCGTATttctgttttgtagtaaaaaaaatattgagaaagatgtttccaatgacatcatcaaccattTTGTATTTAATGCCTACTCACAATTAGTCATAATcatcttcctctttcttttttcTACAAAACAACGCACCATTTTCAcacatgttgatgttggggtggtgctggaaaTGGTAGATATGAAGTAGAACAATTTTAGTTTCCCTTTGTTATTTCACTGCACTTATATTTTATTGAGCATTGTGCAATTGGCTTGTATTTGACCAACGTACAGTCCTCACAATACTTGTTATAATATTTGTTGTTTGGCTGGTCATATTTTCAAAACCAATTATTATAGAAGGTATGGTAGGGTTTACTAAAAACTTCAAATAAAGGTTAAGTTACATACACGATCCACTTGGTGGAGACATTGACCAAAACATTGAAGTTGAACATTAAATATTTGAGCTCAACTGAAAACAGATACCTTACTGCTAACTGAAGGAAATATAATACCATTTCTAAGGCAGTTTGTTGTGTCCTGTATATGTCACACAGTTGATACTTTTAAAGCATACAATTACACATTTCCCTCAGACTGAA

Function

NR:

description
GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558206.2 True 1867 mRNA 0.47 3 45133029 45135645

Neighbor

gene id symbol gene type direction distance location
il-8 il-8 coding downstream 45939 45085269 ~ 45087130 (-)
LOC110486528 LOC106607047 coding downstream 98624 45029764 ~ 45034405 (-)
LOC110486524 LOC106607044 coding downstream 173369 44955574 ~ 44959660 (-)
LOC110486521 rbp coding downstream 268803 44856937 ~ 44864226 (-)
tdx tdx coding downstream 280356 44850578 ~ 44852940 (-)
LOC110486530 LOC106601319 coding upstream 1111 45136756 ~ 45143108 (-)
ankrd54 LOC106607054 coding upstream 7683 45143328 ~ 45145991 (-)
LOC110485190 LOC106601322 coding upstream 12919 45148564 ~ 45150974 (-)
LOC110486535 mcm5 coding upstream 19081 45154726 ~ 45159515 (-)
gcat gcat coding upstream 24169 45159814 ~ 45165419 (-)
G1178980 LOC106601324 non-coding downstream 111282 45020298 ~ 45021747 (-)
G1178974 NA non-coding downstream 118284 45012785 ~ 45014745 (-)
G1178962 NA non-coding downstream 137026 44994826 ~ 44996003 (-)
G1178959 smarca4 non-coding downstream 142436 44988969 ~ 44990593 (-)
G1178946 LOC106607042 non-coding downstream 171146 44946191 ~ 44961883 (-)
G1179064 NA non-coding upstream 10819 45146464 ~ 45146663 (-)
G1179069 NA non-coding upstream 39294 45174939 ~ 45175366 (-)
G1179074 NA non-coding upstream 43716 45179361 ~ 45179568 (-)
G1179056 NA non-coding upstream 45779 45181424 ~ 45181741 (-)
pik3r6b NA non-coding upstream 65727 45200981 ~ 45213655 (-)
G1178996 NA other downstream 81005 45051576 ~ 45052024 (-)
G1178982 LOC106607046 other downstream 104416 45026515 ~ 45028613 (-)
G1178958 LOC106607010 other downstream 151829 44969210 ~ 44981200 (-)
G1178765 LOC100380669 other downstream 401678 44725639 ~ 44731351 (-)
zgc:171844 LOC106607059 other upstream 47815 45182660 ~ 45193315 (-)
G1179619 LOC106601391 other upstream 393791 45529436 ~ 45530114 (-)
G1179621 LOC106607015 other upstream 396213 45531858 ~ 45532662 (-)
LOC110486586 ubald2 other upstream 1377812 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1747783 46827752 ~ 46915018 (-)

Expression


Co-expression Network