Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486534 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45135680 ~ 45140940 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002468078.2 | True | 343 | mRNA | 0.51 | 3 | 45135680 | 45140940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162612 | LOC106607050 | coding | upstream | 20533 | 45111643 ~ 45115147 (+) |
| LOC110486529 | LOC106607046 | coding | upstream | 107060 | 45026189 ~ 45028620 (+) |
| LOC110486527 | LOC100286593 | coding | upstream | 110087 | 45019307 ~ 45025593 (+) |
| LOC118938604 | NA | coding | upstream | 112386 | 45023197 ~ 45023294 (+) |
| LOC100135849 | LOC106607045 | coding | upstream | 120310 | 45001558 ~ 45015370 (+) |
| hmox1a | LOC106607056 | coding | downstream | 11142 | 45152082 ~ 45154732 (+) |
| LOC110486541 | LOC106607062 | coding | downstream | 82529 | 45223469 ~ 45268420 (+) |
| usp43b | LOC106601383 | coding | downstream | 217799 | 45358739 ~ 45451742 (+) |
| LOC110486545 | grb2 | coding | downstream | 343858 | 45484798 ~ 45524322 (+) |
| trnas-aga-61 | NA | coding | downstream | 385865 | 45526805 ~ 45526886 (+) |
| G1178555 | NA | non-coding | upstream | 33859 | 45066398 ~ 45101821 (+) |
| G1178587 | il-8 | non-coding | upstream | 48472 | 45085263 ~ 45087208 (+) |
| G1178554 | NA | non-coding | upstream | 84316 | 45051164 ~ 45051364 (+) |
| G1178549 | NA | non-coding | upstream | 90478 | 45044951 ~ 45045202 (+) |
| G1178541 | NA | non-coding | upstream | 99709 | 45035675 ~ 45035971 (+) |
| G1178617 | NA | non-coding | downstream | 5283 | 45146223 ~ 45147982 (+) |
| G1178630 | NA | non-coding | downstream | 25110 | 45166050 ~ 45166423 (+) |
| G1178631 | NA | non-coding | downstream | 26336 | 45167276 ~ 45168172 (+) |
| G1178655 | NA | non-coding | downstream | 53065 | 45194005 ~ 45194242 (+) |
| G1178658 | NA | non-coding | downstream | 59285 | 45200225 ~ 45201070 (+) |
| LOC110486526 | smarca4 | other | upstream | 165961 | 44967368 ~ 44996127 (+) |
| LOC110485188 | LOC106601310 | other | upstream | 209363 | 44878675 ~ 44943951 (+) |
| G1178425 | NA | other | upstream | 271497 | 44859869 ~ 44864183 (+) |
| G1178363 | NA | other | upstream | 467221 | 44668068 ~ 44668459 (+) |
| LOC110486491 | LOC106607082 | other | upstream | 930110 | 44174050 ~ 44211083 (+) |
| G1179156 | NA | other | downstream | 171390 | 45312330 ~ 45313033 (+) |
| G1179362 | NA | other | downstream | 321648 | 45462588 ~ 45462943 (+) |
| LOC110485192 | LOC106601391 | other | downstream | 388496 | 45529398 ~ 45554103 (+) |
| LOC118936304 | LOC106601427 | other | downstream | 1033088 | 46173911 ~ 46176562 (+) |
| G1180047 | NA | other | downstream | 1098204 | 46239144 ~ 46273601 (+) |
