mchr1b (LOC106601409)


Basic Information

Item Value
gene id mchr1b
gene name LOC106601409
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45481000 ~ 45484678 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558233.2
TATGCATCTCTGTCTGTCACATAACTTTGTTATGCCTGATGCAGCAATAGGCAATATAGATTAAAGTGTTGTTGTACTAtttaaaacacatttattttacatAGCTAGTTAGATGGTGAAAACATAGGAAAGTGCGTCACCTAGTGGCAAATGGTTTCCACTACGGTCTACACACAAAATAATAATGCTTACACCCTGGTGTCAAGGGACGAAAGGCAATGAAATTAATGATTGGAATACAAATAGCTACATTTCGAAGGATTGTCAATGTCCCCCTATCCTTGTGGCACTTTTTTTGTTCTTAGTTGTTGTCAATCCAACAAACAGTGCCATCACAAACGGGCATCAATATTGACAGTGGCACTGTGTTACTTGTGCACCTAGGCACTTACAAACTGGTATCACACATAGCCTATTATTGCTACGATGCAAAATCAGTTGTCACTACGTGTCTCTATGTACCcctcctctttttctctgccATATAAGGCAGGATGCGAAGCCACCATATGAAATGTTGGCAAGGCACATCACTGTAAACCTCACAGGCTCTCTTTCAAGAAGTATTCTTGTGTGAGGGAGTGCTTTGATTAGCAACACTACTGGTGTAAAGATAGAAGAAGACCAATTGGATTTTGAGGAGAGGCTACAGAAATAGAAGCAGTAAAAGGTCAGTGTGTACAAATTCACCCCGTCTCCACTGAATtactttgattgattgattaattgatgtACTAGAATAATTGGAGCCTGGTTCATCACCAATAATTACAATGCACAGCATAGACAAGGGCGCCCGTGCCTTTCTTTGGGTCTAAGATGTTTACAATTCGGGTTGTAAAGAATGTTGAGTAGTTACAAATGTTTCACCTTTATATTTTTGAGACTGTGATGAGGAGAAGGAATTTCCCGAATATATTTTGATGTCATTACAACAATTCTTGCTACTATGGAATAATACATTTCACTATTCGACAGCATCTATTTGAGCACGAAGTGGGTTTTATTGACAGTAGCCAAGCAGCACAACAATAGTATAGCCTACTGATGGCAGAATATTTATTTCTATAGTCTACTCTGATGGTAATTAGGCCTACGTTATTTGCCTGTTTTCACATCATTTTTCATTTAGAGCCCATCCATTTGTTGAGCTTAGTCTAACTTCGAAATGGACTTCGAAAATGTATCGAATGAGAACTGGTCTCAGACGTCTCTCCCATCATATAACTCACCCGAAAGTCCAGCAGAAAATGATGTGCCCTACCACAACGTCCTAATGCCCAGCATTTTCGGTGTCATCTGTTTCTTTGGGATTATTGGCAACTGCATTGTCATCTACACCATTGTGAAGAAGACCAAGTTCCGAGCCCAGCAGACAGTGCCGGACATCTTCATCTTCAGCTTGTCTTTAGtggacctcctcttcctcctgggcATGCCCTTCCTCATCCACCAGCTCCTGGGCAACGGTTCCTGGTGCTTTGGTGACATCATGTGCACGGTCATAACCGCCTTGGACTCCAACAGCCAGATAGTGAGCACCTACATCCTCACCGTCATGACTCTGGACCGCTACCTGGCCACGGTCCATCCCATCCGCTTCAACCATGTGCGCACACCCTGCATGGCGGGGGCTGCGGTGGGTCTGGTGTGGGTGCTCTCACTGGTCTCCATCACTCCCGTGTGGATGTATGCTGGCCTTATGCCCCGAGGGGACGGCTCAGTGGGCTGTGCCCTCCTGCTGCCCAATCCAGCCACTGACACCTACTGGTTTACCCTCTACCAGTTTGTGATGGCCTTCGCCCTGCCTCTGGTCATCATCTGCGTGGTGTTCTTCAAGATCCTTCAGAACATGTCTGCCACAGTGGCCCCCCTGCCCCAGCGCAGCTTGAGAGTACGTACACGTAAGGTGACCCGTATGGCtgtggctatatgcctggccttCTTCATCTGCTGGGCTCCGTACTACATCCTGCAGCTGGCCCACCTGGGGGTTCAGAGGCCCAGCTTTGCCTTCCTCTATGTCTACAACATTGCCATCAGCATGGGTTACGCTAACAGCTGCGTCAACCCATACCTCTACATTTTGCTGAGTGAGACCTTTAAGAGGCAGTTCATTGTGGCCATCCGGCCGAACAATCGGGTCTTCAGGTTGAACTCTGTCATGGCTGACGGTAGTGTGAGTCTGAGACTGGCCCCAGAGTGTAATCATCAGTCTCAGTCCTCCAGAGACCTACTAGTACACAACATGCTGCCTGTCACTGTGGCTGTGCACTGAGTCAGAAGCCCTAGCcgagccccatccctcagccctAGTTCCATGAATCTGGGCTCTCTCTCAGCTCAGTGGGAAGTGGTGCCCCCATCAGACAGTCATGCTCCCAATGTGTATGACAGGGTTAACGTGCAATGTATGTAGAAATGCTGAGTGTGTACAGTATCTATTTTGTACACAGCAGTACTGTGTTTATAAGACACTTTTCCCTACAGGGACATTCAACTTCATCCTATTAATCCTATCCTATCATGCTCTAATGAAGGAACTGTGAATACAGGGACTTTGTACTAGTATTCAGTAGGCAATTGAACTGTAGGCTATTAGTAACAATGTGAACTTTTATAAAAGGAAGTCAGCCCACAGTTATCAATAACACTATTTTGCAGTTCTGTTTCAAGTGGTAACAATTTGTATTTCGTTTTCTTTGATGATTTGACAGAATTCCACTTCAGTTCAATGTGTTAAAACAGGTTTATTTGTAGATATGTGATATTCTGTGATTCTGTCATCGGTCCGTCCAGTCAGTGATCTGAGATGCAGGGAAATCACACCTTGTCGTAATGTAATCTATGTCTATACTGGGACCTGTGTGATGACTGTGATCATTGAGAAAGTTGTGACATATTGATGTATTATTGTGGGCTATCTTCTAATGTGTTGTCCTTAGTCATTTTGTAATATTGAATATGTGCAGCCTGTCTATTACCATGTAATGTCCGTGATCACCAAGGAAACCTCTAGGTTGTTATCTTTGGGAAAATAATAATGTTCTGATGCACGATACAGTGTTGAATGACTGCAATTGATCCAAAGGGATTTCTagatgttacaataaagaattAAAGCATGAGACGTAAGAAAAACCCAATGC

Function

NR:

description
melanin-concentrating hormone receptor 1-like

GO: NA

KEGG:

id description
K04320 MCHR1; melanin-concentrating hormone receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558233.2 True 3149 mRNA 0.44 2 45481000 45484678

Neighbor

gene id symbol gene type direction distance location
LOC110486542 LOC106608160 coding downstream 147968 45300733 ~ 45333032 (-)
pik3r6b NA coding downstream 267345 45200981 ~ 45213655 (-)
LOC110485191 LOC106601377 coding downstream 285023 45194711 ~ 45195977 (-)
zgc:171844 LOC106607059 coding downstream 287685 45182660 ~ 45193315 (-)
tom1 LOC106607057 coding downstream 306978 45166694 ~ 45174022 (-)
trnas-aga-60 NA coding upstream 41911 45526589 ~ 45526670 (-)
LOC100135782 LOC106607000 coding upstream 167218 45651896 ~ 45654777 (-)
LOC110486550 LOC106601398 coding upstream 170220 45654898 ~ 45677812 (-)
LOC110486551 fbf1 coding upstream 196180 45680858 ~ 45692892 (-)
LOC110486553 NA coding upstream 219329 45704005 ~ 45709228 (-)
G1179318 NA non-coding downstream 25146 45453959 ~ 45455854 (-)
G1179346 NA non-coding downstream 35561 45444241 ~ 45445439 (-)
G1179344 NA non-coding downstream 37424 45443237 ~ 45443576 (-)
G1179209 NA non-coding downstream 128098 45352570 ~ 45352902 (-)
G1179208 NA non-coding downstream 135574 45345215 ~ 45345426 (-)
G1179625 NA non-coding upstream 53590 45538268 ~ 45538793 (-)
G1179630 NA non-coding upstream 63145 45547823 ~ 45548058 (-)
G1179629 NA non-coding upstream 63847 45548525 ~ 45549374 (-)
G1179658 LOC105891918 non-coding upstream 122716 45607394 ~ 45627018 (-)
G1179685 NA non-coding upstream 155212 45639890 ~ 45640411 (-)
il-8 il-8 other downstream 393870 45085269 ~ 45087130 (-)
G1178996 NA other downstream 428976 45051576 ~ 45052024 (-)
G1178982 LOC106607046 other downstream 452387 45026515 ~ 45028613 (-)
G1178958 LOC106607010 other downstream 499800 44969210 ~ 44981200 (-)
G1179619 LOC106601391 other upstream 44758 45529436 ~ 45530114 (-)
G1179621 LOC106607015 other upstream 47180 45531858 ~ 45532662 (-)
LOC110486586 ubald2 other upstream 1028779 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1398750 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 1948118 47432406 ~ 47433949 (-)

Expression


Co-expression Network