trnas-aga-60



Basic Information


Item Value
gene id trnas-aga-60
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 45526589 ~ 45526670 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnas-aga-60
gttgtcgtggccgagtggttaaggcgatggactagaaatccattgggatcttcccgcgcaggttcgaatcctgccgacaacg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnas-aga-60 True 82 mRNA 0.56 1 45526589 45526670

Neighbor


gene id symbol gene type direction distance location
mchr1b LOC106601409 coding downstream 41911 45481000 ~ 45484678 (-)
LOC110486542 LOC106608160 coding downstream 193557 45300733 ~ 45333032 (-)
pik3r6b NA coding downstream 312934 45200981 ~ 45213655 (-)
LOC110485191 LOC106601377 coding downstream 330612 45194711 ~ 45195977 (-)
zgc:171844 LOC106607059 coding downstream 333274 45182660 ~ 45193315 (-)
LOC100135782 LOC106607000 coding upstream 125226 45651896 ~ 45654777 (-)
LOC110486550 LOC106601398 coding upstream 128228 45654898 ~ 45677812 (-)
LOC110486551 fbf1 coding upstream 154188 45680858 ~ 45692892 (-)
LOC110486553 NA coding upstream 177337 45704005 ~ 45709228 (-)
LOC110486554 cygb coding upstream 183479 45710149 ~ 45716653 (-)
G1179318 NA non-coding downstream 70735 45453959 ~ 45455854 (-)
G1179346 NA non-coding downstream 81150 45444241 ~ 45445439 (-)
G1179344 NA non-coding downstream 83013 45443237 ~ 45443576 (-)
G1179209 NA non-coding downstream 173687 45352570 ~ 45352902 (-)
G1179208 NA non-coding downstream 181163 45345215 ~ 45345426 (-)
G1179625 NA non-coding upstream 11598 45538268 ~ 45538793 (-)
G1179630 NA non-coding upstream 21153 45547823 ~ 45548058 (-)
G1179629 NA non-coding upstream 21855 45548525 ~ 45549374 (-)
G1179658 LOC105891918 non-coding upstream 80724 45607394 ~ 45627018 (-)
G1179685 NA non-coding upstream 113220 45639890 ~ 45640411 (-)
il-8 il-8 other downstream 439459 45085269 ~ 45087130 (-)
G1178996 NA other downstream 474565 45051576 ~ 45052024 (-)
G1178982 LOC106607046 other downstream 497976 45026515 ~ 45028613 (-)
G1178958 LOC106607010 other downstream 545389 44969210 ~ 44981200 (-)
G1179619 LOC106601391 other upstream 2766 45529436 ~ 45530114 (-)
G1179621 LOC106607015 other upstream 5188 45531858 ~ 45532662 (-)
LOC110486586 ubald2 other upstream 986787 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 1356758 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 1906126 47432406 ~ 47433949 (-)

Expression



Co-expression Network