Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938602 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45679530 ~ 45679601 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035810.1 | True | 72 | mRNA | 0.44 | 1 | 45679530 | 45679601 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486549 | LOC106607014 | coding | upstream | 32681 | 45632656 ~ 45646849 (+) |
| LOC110486548 | LOC106607064 | coding | upstream | 52510 | 45621533 ~ 45627020 (+) |
| LOC110486546 | LOC106601396 | coding | upstream | 64911 | 45559934 ~ 45614619 (+) |
| LOC110486547 | LOC106607066 | coding | upstream | 119929 | 45555818 ~ 45559601 (+) |
| LOC110485192 | LOC106601391 | coding | upstream | 125427 | 45529398 ~ 45554103 (+) |
| LOC118938601 | NA | coding | downstream | 491 | 45680092 ~ 45680163 (+) |
| LOC118938603 | NA | coding | downstream | 723 | 45680324 ~ 45680396 (+) |
| LOC110486555 | LOC106606986 | coding | downstream | 50866 | 45730467 ~ 45742507 (+) |
| LOC110486558 | LOC106601405 | coding | downstream | 133531 | 45813132 ~ 45881286 (+) |
| LOC110486560 | LOC106606997 | coding | downstream | 232654 | 45912255 ~ 45931007 (+) |
| G1179453 | NA | non-coding | upstream | 8579 | 45670663 ~ 45670951 (+) |
| G1179452 | NA | non-coding | upstream | 9543 | 45669560 ~ 45669987 (+) |
| G1179448 | NA | non-coding | upstream | 16408 | 45662862 ~ 45663122 (+) |
| G1179445 | NA | non-coding | upstream | 23491 | 45655027 ~ 45656039 (+) |
| G1179446 | NA | non-coding | upstream | 25034 | 45653767 ~ 45654496 (+) |
| G1179465 | fbf1 | non-coding | downstream | 10895 | 45690496 ~ 45690869 (+) |
| G1179879 | LOC106601408 | non-coding | downstream | 288469 | 45968070 ~ 45970177 (+) |
| G1179880 | LOC106601408 | non-coding | downstream | 294611 | 45974212 ~ 45975156 (+) |
| G1179952 | NA | non-coding | downstream | 400684 | 46080285 ~ 46080840 (+) |
| G1179953 | NA | non-coding | downstream | 401719 | 46081320 ~ 46085758 (+) |
| G1179362 | NA | other | upstream | 216587 | 45462588 ~ 45462943 (+) |
| G1179156 | NA | other | upstream | 366497 | 45312330 ~ 45313033 (+) |
| LOC110486526 | smarca4 | other | upstream | 709811 | 44967368 ~ 44996127 (+) |
| LOC110485188 | LOC106601310 | other | upstream | 753213 | 44878675 ~ 44943951 (+) |
| LOC118936304 | LOC106601427 | other | downstream | 494427 | 46173911 ~ 46176562 (+) |
| G1180047 | NA | other | downstream | 559543 | 46239144 ~ 46273601 (+) |
| LOC110485193 | LOC106601421 | other | downstream | 652117 | 46302751 ~ 46336386 (+) |
| G1181472 | NA | other | downstream | 1694562 | 47374163 ~ 47374477 (+) |
| tmem100a | LOC106606948 | other | downstream | 1788515 | 47468012 ~ 47471205 (+) |
