recql5 (LOC106601412)


Basic Information

Item Value
gene id recql5
gene name LOC106601412
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 46212178 ~ 46228955 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558276.2
GGCATGATGTCATCGATACGCGACGACTAGAGAATGAAGTTTGTTGTCAAGTTGGACGTTTTTCTGGATAAGAGATGACTTCCATTAAAAAGGCGTTAAAAACCCATTTTGGGTTCGATAAGTTCCGATCCCAGAAGCAGGAGGACGTTGTTAAAGCAGTTGTTAAAGGTGACCGGGATGTTTTTGTGTGCATGCCCACCGGGGCAGGGAAGTCCCTCTGCTACCAGCTTCCCGCAGTGTTGGCTAAGGGTATTACCTTGGTCATATCCCCTCTTATCGCTCTCATCCAGGACCAAGTGGACCACCTAAGGGACCTGAACATTCCTGCATGCTCCATCAACTCCAAGCTCCCTGCAGGGGAGCGCCGTCTGATCCTGGCCGATCTGGAGAGTGAGAGCCCCAGGTTGAAGCTGCTTTACATCACCCCAGAGATGGTGGCCTCCTCTGCCTTCCAGCCCTGCCTTACAGGCCTTCTCTCCCGGAGCCTCCTCTCCTACCTGGCTGTGGACGAGGCTCACTGTGTCTCCCAGTGGGGGCATGACTTCAGACCAGACTACCTCAAACTGGGCAGTCTGCGTGCCCGTCTGCCCGGGATACCCTGCGTGGCGCTGACGGCCACGGCACCCCAGAAGGTGCAGGAGGACATAGCAAAGTCCCTGAGGCTGCGATCACCGCTGTCCTTTGCCACACCTGTGTTTCGCAGTAACCTGCATTATGAGGTGGTGTACAGGGAGCTACTAGAGGACCCTTACAAGCACCTGCATGCCTTCATCAGGGAGGCCCTGACTCTGGGGGAAGGCCCCAAAGGACAGGGTTGTGGAATTGTGTACTGTCGGACCAGAGATGGCTGTGAGACGGTGGCTTACCAACTGACTAAGCTTGGAGTCCTGGCCAAGCCTTACCATGCAGGGTTGAAGGCAGGAGATCGCACAGAGGCTCAGACTGATTGGATGCAGGGTAAGGTGCTTGTCATTGTGGCCACCATCAGCTTTGGCATGGGGGTGGACAAATCTAATGTCAGGTTTGTGGCCCATTGGAACCTTGCCAAGTCACTAGCCAGTTACTACCAGGAATCTGGGCGTGCGGGGCGAGACGGGCTGCCCTCTTCCTGCAGGACGTACTACTCCCCCAAGGACAGGGAGCAGTTGAACTTCCTCATCCGCAAGGAGGTGGCCCGCAAACAGGCAAAGCGTGGCTCCGAGAAAGATCAGGACAAGGCTTCCATCACAGACTTCGAGGCCATGGTGTCATTCTGTGAGCAAGAGGGCTGCCGCCATGCCACCATCTCCAAGTTCTTTGGGGACCAGAAGCCGGACTGTGCGGGGGCCTGTGACTACTGTCGTGACCCCAAGGCTGTGCGGGCCCAGCTGGAGAAGGGGGCCACTTTGTGCACCAAGACTGGAGCAGCTTGGAGCACACAGCCCAGGGGCCCGTTTGGGTTTGACCGTGACCTCTACGCCGGGGGGAGGAAGGGCTACGGCTTTGAGAGGCATGATGAGGAGGGCTGGGagagtggtggtgatgatgatggctcCGAGCATCGGAGGAAGGAGTTTGGAGATCTCTTCAAGAAACAAATGAACCTGCGCAAGGTTTCTGAGAGACACAAAGATTCATTTATCCCCCCAGATGATAACTGCCCACTCAGGGAGGCCAGCAGCCAGAAAATCCCCAGGCTCACTGTCAAGGCCCGGGAGCACTGTGTGGCCCTGTTACAGGAGGCTCTGAACAACCACCAGGTGGcagcagcagacacacacagCTCTGACACACTCTCCTTGGCAGTGGATATTGAACATGAGGTCTTCAAGATCACCAAGTCTTCCAACCTGTACAAAGCAGCTGTCCTGAAGAGAGTATCAGAGATGAAGAAGGGAGGGGCTGCCTctgcaggaggaggaagagaagggaccAGCGGCTCTGGGGAATCCACAGAGATAAAGACTGAATCCAAAGAAGAagcagcctcctcttcctccttgacTGAGGAGCAACAGGGCTTCACGCCTGCCTCACAGATCTACTCACTAAAGCGGAAGAGAATAGGAGCAGGTCTGAGGGGCTCCTCCAACCCCTTCCAGACTGCCAGTGAGCTGATGAGGGCCTCTAACTGTGAGGTCTCCACTACAGGTCCAGGGGCCAACAGTGGGACAGGGAGCGGGGGCCCTGACTGCCTGGCTGGGTCTGGAGAGTCAGccggtgaggaggagagggggaagaggaaggagacAAATACTGGAGATACAGCACCAACCATCAGCTCCTCCATCAGAGCTAAAGCCAGTGCAGTCTCTGCCTTCTTGAACAGTCCCACCAAGACAGGAGGCAAGGCCCTGAGCAAGAAGCAGAAGCTAGCAGAGGCTGCTAAGAACTCCCGCAACATTACCCAGTACTTTGGGAAGAAACCGATTGAAAAGAGTCAAGAGGTGGAGATAAGAACCAATGATGTGTCATCTCAGGCCTTTTCAATACCACCCCAGTCACTCCCCACTCAGGAAATCACACCTGCTACTGTCTCCATGGATACCATCCCTATGGACACTAGTCCCATGGAAATCATCCCCACAGAAACCATCCCCATTGAAACTATCCCTATGGACACCATCCCCACAGAAATCAACAACTTGGATAATGATGAGGAGGAGGTTAAAGAGGAAGCTAAACTGGACTTGGACTCTATCACAGTGCAAAATGCACATGAAAACAAGGCTAAATCGTTGCTAAAACTAAGGctatgTGAAGAGAGGGAGGCCCTCCCTCCAGCCAAGCGCAGCTGCCCCCTACAGGACAGCAGGAAGAAGGTGACCTTTAACCCCAAAGTCCAGGAGACTGTACTGGAGCCAGGGAGCCCAAGCAAAGCCCCCAAGCCTGTGTCTCTGAAGGAGGTGGCTGACATCGTGGTGCGCTGTCTAGACCCCTTCTATACGCAGGGCAAGTTTGCCAccaagGAGCTGTTCAAGTCATTTGCCCGCTACTTGTCTCATCTACTAGCAGAGGGGAGGAGTAGGGGAAGAGGTCAAGTGAAAATGCAGGCCAGGAATCTGATAAAGAAGTTCTTCAGCAGTGTGAAGCGCTGTGAGAGTGAAGCAGACTGGAAGCACCTGAAGGGACCACACAGCACTGAGACCTCTGAACacagagggatgggaggaggCGGGACTATGAACAGAAAGGTGGAGGAGGATAACAACCTGGGGGTCTGATCCCTTCATCCACTCTCGCTCTCCAACTGATTCCCTCCCTCACATCTCTCCCAGGCCAAGATACTGAGCCGTTTCAGAGATGATATGCTGCTATGCTGTGTCAACTCCAGGCTCATGCTGTCGTGGCGTGGAGAGCCGCTGTAATGGCGGCTATTAAACATGTACTGTATACAGCATGTCTGCTGATGCTGCTATGGAACAAGTAGTCATCCCTGCTCAACGCCGAACAGAGGTGGCTCTTTGTTTGATGTTAGCACCATGTGACTAGGACATGGATGCTATGGCTATACCAGGCCAAACCCTGCTGCTACCTGGTCTGTCATTCTGCCTGACTAAAGAGGACAGCCAGCTGGATGTGTAACAACCACACTCTATCCTTGATTGATTTTAGAGATGTAATTTAATGTCTTTTTTgttgttagtttgttagttatTAGTTGTTTTCATGAGATTCTAAATGAGAACTTTTGTTTATGCTGAGGAATCCCCAAAAATATTAATTTGTTTTTTCTCTTGTCCTTATTGTTATCTGGTACAAAGTTCTTAAAAGATCAGCGCTGGCCACGTCTGCCTGTGCAGGTTGGTGACAGGGTGGGTGACTTTTCAAACAGTCAGTCATTTCAAACATGATGGAATCCAAAGAGCACTTGATGTACCAATGGGGAAAAACACCCAGCCATCACAGAAATGTATCTAAACAAAAACCCAGCCTTCACACACTATTGCTCCATGTGAGACCTGTAAAATAAAATATCTTAACACTGAA
>XR_002468086.2
CGACTGGCATGATGTCATCGATACGCGACGACTAGAGAATGAAGTTTGTTGTCAAGTTGGACGTTTTTCTGGATAAGAGATGACTTCCATTAAAAAGGCGTTAAAAACCCATTTTGGGTTCGATAAGTTCCGATCCCAGAAGCAGGAGGACGTTGTTAAAGCAGTTGTTAAAGGTGACCGGGATGTTTTTGTGTGCATGCCCACCGGGGCAGGGAAGTCCCTCTGCTACCAGCTTCCCGCAGTGTTGGCTAAGGGTATTACCTTGGTCATATCCCCTCTTATCGCTCTCATCCAGGACCAAGTGGACCACCTAAGGGACCTGAACATTCCTGCATGCTCCATCAACTCCAAGCTCCCTGCAGGGGAGCGCCGTCTGATCCTGGCCGATCTGGAGAGTGAGAGCCCCAGGTTGAAGCTGCTTTACATCACCCCAGAGATGGTGGCCTCCTCTGCCTTCCAGCCCTGCCTTACAGGCCTTCTCTCCCGGAGCCTCCTCTCCTACCTGGCTGTGGACGAGGCTCACTGTGTCTCCCAGTGGGGGCATGACTTCAGACCAGACTACCTCAAACTGGGCAGTCTGCGTGCCCGTCTGCCCGGGATACCCTGCGTGGCGCTGACGGCCACGGCACCCCAGAAGGTGCAGGAGGACATAGCAAAGTCCCTGAGGCTGCGATCACCGCTGTCCTTTGCCACACCTGTGTTTCGCAGTAACCTGCATTATGAGGTGGTGTACAGGGAGCTACTAGAGGACCCTTACAAGCACCTGCATGCCTTCATCAGGGAGGCCCTGACTCTGGGGGAAGGCCCCAAAGGACAGGGTTGTGGAATTGTGTACTGTCGGACCAGAGATGGCTGTGAGACGGTGGCTTACCAACTGACTAAGCTTGGAGTCCTGGCCAAGCCTTACCATGCAGGGTTGAAGGCAGGAGATCGCACAGAGGCTCAGACTGATTGGATGCAGGGTAAGGTGCTTGTCATTGTGGCCACCATCAGCTTTGGCATGGGGGTGGACAAATCTAATGTCAGGTTTGTGGCCCATTGGAACCTTGCCAAGTCACTAGCCAGTTACTACCAGGAATCTGGGCGTGCGGGGCGAGACGGGCTGCCCTCTTCCTGCAGGACGTACTACTCCCCCAAGGACAGGGAGCAGTTGAACTTCCTCATCCGCAAGGAGGTGGCCCGCAAACAGGCAAAGCGTGGCTCCGAGAAAGATCAGGACAAGGCTTCCATCACAGACTTCGAGGCCATGGTGTCATTCTGTGAGCAAGAGGGCTGCCGCCATGCCACCATCTCCAAGTTCTTTGGGGACCAGAAGCCGGACTGTGCGGGGGCCTGTGACTACTGTCGTGACCCCAAGGCTGTGCGGGCCCAGCTGGAGAAGGGGGCCACTTTGTGCACCAAGACTGGAGCAGCTTGGAGCACACAGCCCAGGGGCCCGTTTGGGTTTGACCGTGACCTCTACGCCGGGGGGAGGAAGGGCTACGGCTTTGAGAGGCATGATGAGGAGGGCTGGGagagtggtggtgatgatgatggctcCGAGCATCGGAGGAAGGAGTTTGGAGATCTCTTCAAGAAACAAATGAACCTGCGCAAGGTTTCTGAGAGACACAAAGATTCATTTATCCCCCCAGATGATAACTGCCCACTCAGGGAGGCCAGCAGCCAGAAAATCCCCAGGCTCACTGTCAAGGCCCGGGAGCACTGTGTGGCCCTGTTACAGGAGGCTCTGAACAACCACCAGGTGGcagcagcagacacacacagCTCTGACACACTCTCCTTGGCAGTGGATATTGAACATGAGGTCTTCAAGATCACCAAGTCTTCCAACCTGTACAAAGCAGCTGTCCTGAAGAGAGTATCAGAGATGAAGAAGGGAGGGGCTGCCTctgcaggaggaggaagagaagggaccAGCGGCTCTGGGGAATCCACAGAGATAAAGACTGAATCCAAAGAAGAagcagcctcctcttcctccttgacTGAGGAGCAACAGGGCTTCACGCCTGCCTCACAGATCTACTCACTAAAGCGGAAGAGAATAGGAGCAGGTCTGAGGGGCTCCTCCAACCCCTTCCAGACTGCCAGTGAGCTGATGAGGGCCTCTAACTGTGAGGTCTCCACTACAGGTCCAGGGGCCAACAGTGGGACAGGGAGCGGGGGCCCTGACTGCCTGGCTGGGTCTGGAGAGTCAGccggtgaggaggagagggggaagaggaaggagacAAATACTGGAGATACAGCACCAACCATCAGCTCCTCCATCAGAGCTAAAGCCAGTGCAGTCTCTGCCTTCTTGAACAGTCCCACCAAGACAGGAGGCAAGGCCCTGAGCAAGAAGCAGAAGCTAGCAGAGGCTGCTAAGAACTCCCGCAACATTACCCAGTACTTTGGGAAGAAACCGATTGAAAAGAGTCAAGAGGTGGAGATAAGAACCAATGATGTGTCATCTCAGGCCTTTTCAATACCACCCCAGTCACTCCCCACTCAGGAAATCACACCTGCTACTGTCTCCATGGATACCATCCCTATGGACACTAGTCCCATGGAAATCATCCCCACAGAAACCATCCCCATTGAAACTATCCCTATGGACACCATCCCCACAGAAATCAACAACTTGGATAATGATGAGGAGGAGGTTAAAGAGGAAGCTAAACTGGACTTGGACTCTATCACAGTGCAAAATGCACATGAAAACAAGGCTAAATCGTTGCTAAAACTAAGGctatgTGAAGAGAGGGAGGCCCTCCCTCCAGCCAAGCGCAGCTGCCCCCTACAGGACAGCAGGAAGAAGGTGACCTTTAACCCCAAAGTCCAGGAGACTGTACTGGAGCCAGGGAGCCCAAGCAAAGCCCCCAAGCCTGTGTCTCTGAAGGAGGTGGCTGACATCGTGGTGCGCTGTCTAGACCCCTTCTATACGCAGGGCAAGTTTGCCAccaagTATTCCAAATCTTCCTTGTTGTAGGAGCTGTTCAAGTCATTTGCCCGCTACTTGTCTCATCTACTAGCAGAGGGGAGGAGTAGGGGAAGAGGTCAAGTGAAAATGCAGGCCAGGAATCTGATAAAGAAGTTCTTCAGCAGTGTGAAGCGCTGTGAGAGTGAAGCAGACTGGAAGCACCTGAAGGGACCACACAGCACTGAGACCTCTGAACacagagggatgggaggaggCGGGACTATGAACAGAAAGGTGGAGGAGGATAACAACCTGGGGGTCTGATCCCTTCATCCACTCTCGCTCTCCAACTGATTCCCTCCCTCACATCTCTCCCAGGCCAAGATACTGAGCCGTTTCAG
>XR_002468087.2
CTTTCTTTATTATGTGCCGACTGGCATGATGTCATCGATACGCGACGACTAGAGAATGAAGTTTGTTGTCAAGTTGGACGTTTTTCTGGATAAGAGATGACTTCCATTAAAAAGGCGTTAAAAACCCATTTTGGGTTCGATAAGTTCCGATCCCAGAAGCAGGAGGACGTTGTTAAAGCAGTTGTTAAAGGTGACCGGGATGTTTTTGTGTGCATGCCCACCGGGGCAGGGAAGTCCCTCTGCTACCAGCTTCCCGCAGTGTTGGCTAAGGGTATTACCTTGGTCATATCCCCTCTTATCGCTCTCATCCAGGACCAAGTGGACCACCTAAGGGACCTGAACATTCCTGCATGCTCCATCAACTCCAAGCTCCCTGCAGGGGAGCGCCGTCTGATCCTGGCCGATCTGGAGAGTGAGAGCCCCAGGTTGAAGCTGCTTTACATCACCCCAGAGATGGTGGCCTCCTCTGCCTTCCAGCCCTGCCTTACAGGCCTTCTCTCCCGGAGCCTCCTCTCCTACCTGGCTGTGGACGAGGCTCACTGTGTCTCCCAGTGGGGGCATGACTTCAGACCAGACTACCTCAAACTGGGCAGTCTGCGTGCCCGTCTGCCCGGGATACCCTGCGTGGCGCTGACGGCCACGGCACCCCAGAAGGTGCAGGAGGACATAGCAAAGTCCCTGAGGCTGCGATCACCGCTGTCCTTTGCCACACCTGTGTTTCGCAGTAACCTGCATTATGAGGTGGTGTACAGGGAGCTACTAGAGGACCCTTACAAGCACCTGCATGCCTTCATCAGGGAGGCCCTGACTCTGGGGGAAGGCCCCAAAGGACAGGGTTGTGGAATTGTGTACTGTCGGACCAGAGATGGCTGTGAGACGGTGGCTTACCAACTGACTAAGCTTGGAGTCCTGGCCAAGCCTTACCATGCAGGGTTGAAGGCAGGAGATCGCACAGAGGCTCAGACTGATTGGATGCAGGGTAAGGTGCTTGTCATTGTGGCCACCATCAGCTTTGGCATGGGGGTGGACAAATCTAATGTCAGGTTTGTGGCCCATTGGAACCTTGCCAAGTCACTAGCCAGTTACTACCAGGAATCTGGGCGTGCGGGGCGAGACGGGCTGCCCTCTTCCTGCAGGACGTACTACTCCCCCAAGGACAGGGAGCAGTTGAACTTCCTCATCCGCAAGGAGGTGGCCCGCAAACAGGCAAAGCGTGGCTCCGAGAAAGATCAGGACAAGGCTTCCATCACAGACTTCGAGGCCATGGTGTCATTCTGTGAGCAAGAGGGCTGCCGCCATGCCACCATCTCCAAGTTCTTTGGGGACCAGAAGCCGGACTGTGCGGGGGCCTGTGACTACTGTCGTGACCCCAAGGCTGTGCGGGCCCAGCTGGAGAAGGGGGCCACTTTGTGCACCAAGACTGGAGCAGCTTGGAGCACACAGCCCAGGGGCCCGTTTGGGTTTGACCGTGACCTCTACGCCGGGGGGAGGAAGGGCTACGGCTTTGAGAGGCATGATGAGGAGGGCTGGGagagtggtggtgatgatgatggctcCGAGCATCGGAGGAAGGAGTTTGGAGATCTCTTCAAGAAACAAATGAACCTGCGCAAGGTTTCTGAGAGACACAAAGATTCATTTATCCCCCCAGATGATAACTGCCCACTCAGGGAGGCCAGCAGCCAGAAAATCCCCAGGCTCACTGTCAAGCTCTGACACACTCTCCTTGGCAGTGGATATTGAACATGAGGTCTTCAAGATCACCAAGTCTTCCAACCTGTACAAAGCAGCTGTCCTGAAGAGAGTATCAGAGATGAAGAAGGGAGGGGCTGCCTctgcaggaggaggaagagaaggga

Function

NR:

description
ATP-dependent DNA helicase Q5

GO: NA

KEGG:

id description
K10902 RECQL5; ATP-dependent DNA helicase Q5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558276.2 False 3969 mRNA 0.53 18 46212178 46228933
XR_002468086.2 False 3309 mRNA 0.55 18 46212867 46228938
XR_002468087.2 True 1859 mRNA 0.56 12 46214869 46228955

Neighbor

gene id symbol gene type direction distance location
LOC110486567 LOC106606966 coding downstream 433 46201026 ~ 46211745 (-)
LOC110486561 LOC106601408 coding downstream 234775 45968064 ~ 45977403 (-)
LOC110486556 LOC106601411 coding downstream 465069 45744953 ~ 45747109 (-)
LOC110486554 cygb coding downstream 495525 45710149 ~ 45716653 (-)
LOC110486553 NA coding downstream 502950 45704005 ~ 45709228 (-)
LOC110486569 LOC106601418 coding upstream 1429 46230384 ~ 46235927 (-)
LOC118938311 LOC106601426 coding upstream 16510 46245465 ~ 46254192 (-)
LOC110486575 LOC106596896 coding upstream 107589 46336544 ~ 46422381 (-)
LOC110486578 st6galnac2 coding upstream 193753 46422708 ~ 46428266 (-)
LOC110486579 NA coding upstream 212041 46440996 ~ 46468343 (-)
G1180309 LOC106601422 non-coding downstream 28810 46179960 ~ 46183368 (-)
G1180396 LOC106601427 non-coding downstream 35615 46174701 ~ 46176563 (-)
G1180280 NA non-coding downstream 290012 45912130 ~ 45922166 (-)
G1179843 NA non-coding downstream 305276 45906679 ~ 45906902 (-)
G1179842 NA non-coding downstream 305522 45906373 ~ 45906656 (-)
G1180488 LOC106606977 non-coding upstream 40947 46269902 ~ 46272249 (-)
G1180493 NA non-coding upstream 52623 46281578 ~ 46281802 (-)
G1180504 NA non-coding upstream 69073 46298028 ~ 46298267 (-)
G1180506 NA non-coding upstream 73526 46302481 ~ 46302702 (-)
G1180499 NA non-coding upstream 102771 46331726 ~ 46334543 (-)
G1179621 LOC106607015 other downstream 679516 45531858 ~ 45532662 (-)
G1179619 LOC106601391 other downstream 682064 45529436 ~ 45530114 (-)
zgc:171844 LOC106607059 other downstream 1018873 45182660 ~ 45193315 (-)
il-8 il-8 other downstream 1125048 45085269 ~ 45087130 (-)
G1178996 NA other downstream 1160154 45051576 ~ 45052024 (-)
LOC110486586 ubald2 other upstream 284502 46510585 ~ 46535713 (-)
LOC110486590 LOC105022923 other upstream 654473 46827752 ~ 46915018 (-)
LOC110486593 LOC106606954 other upstream 1203841 47432406 ~ 47433949 (-)
LOC110486594 LOC106601485 other upstream 1233326 47460436 ~ 47466735 (-)
LOC110486618 LOC106606909 other upstream 1774076 47999581 ~ 48015951 (-)

Expression


Co-expression Network