mettl23 (mettl23)


Basic Information

Item Value
gene id mettl23
gene name mettl23
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 46483136 ~ 46485100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558296.2
AGCCCGCCCACCCATTGAGCCGCAGGAAGCTCGTTGGTCACATATAAGAGCGAGCCATAAAACCGATTGGATAAAATGTAAAATACGCCTTCCCACCAGTGATTAGCACATGTCATTGGCTGTATACGTTCTACGTTTTCCCGTCCTCCAGCAGACAGTCGCAAGCgtgtctgtttttttttagaaGAGATGGGTTTTATGACAGTAAACGTAACGTTTTACCATTGAATTGATTTACTAACTCTCATTTTCACAATTGGGATGGTAAATGGAAAACAGAGCAACTGAGATGTCCAACATAGTGCAGAAATCGTTCACATTCGAAGAATACGAAGACCCGAAGCAATCACTGAATGTTTCCATCCCTGAGGTCCTTGACCCACAATATGGGATGCATGTATGGCCCTGTGCAGTGGTATTAGCACAATATGTGTGGACACATAGGGAAGAGCTGATGCACAAAACAGTGCTAGAGCTTGGGGCTGGCGTGAGTTTACCTGGTGTGGTGGCAGCAAAGTGTGGGGCACAAGTGATCTTGTCAGACAGTGCAGAACTTCCACTGTGTCTGGAGAACTGTAGGCGCACCTGTGAAGTGAATGAACTGCCCAATGTGCTTGTGGTGGGTATTACCTGGGGAGAAGTCTCCCCAGACCTTCTGCTCCTCCCTCCATTAGACATCATCTTGGGATCAGACGTTTTCTATGAGCCGCAAGatttTGAAAATGTCCTGGTGACCATCTCCTTCCTCTTGAGAAAAAACCCTGAGGCCCAATTTTGGACAACTTACCAAGAGAGAAGCGCCGACTGGTCCATAGAGGCACTGCTGCACAAATGGAACTTGAAGTGTCTCAACATTCCACTGGAGAAATTCCATGCCAACAAAGATCAACTAGCTGGGTCAACACTTCCTGGAAGCCATACTGTACAAATGATTATAACTGAGGACAAGGAAAGCTGAATGAAAGACAATTGTCAATTTATCCTTCAGTTACTACCAGCAAGGCACATTCAAAGTCAAGACACAATACAAGATCAATGGTTCAAAACTCAATGAATTATAAAATAGTTtaagttgtatagtagtgttctGTTAAAGTTTTAAAATAAAATGATAATCCAAATGTTTTTGAAGACAATTTTTATTAGCTTTCACATTGGACACCTATACAGACTCTTGCAAGGGGGAAAAGGAATGCACAAAGGGCAAGACAGAATGCATTAAACAAAATTAGCCCACCATACTTAGTGCTCTGAATAAGAGAACATTTTAAATTGTTGAAAGACAGGCATTCTACCGATGGTGAATTTGTAGCAGCCATTTAAGTTGGCCACCATCACAGCATTGTAGCCACAGGGGCATTCCGGAGAACACTGGAAACAGCCAAGCACTGCAACACGCCACCTTAACAGCTAACCAGCAATACTCAACTGCTACACAACTGCGCCTAgtgca
>XM_036941299.1
TTTTACCATTGAATTGATTTACTAACTCTCATTTTCACAATTGGGATGGTAAATGGAAAACAGAGCAACTGAGATGTCCAACATAGTGCAGAAATCGTTCACATTCGAAGAATACGAAGACCCGAAGCAATCACTGAATGTTTCCATCCCTGAGGTTTTTGCGCACTTTCTCTACACTTTTGCCATTTGGAACCAGCGATGTTCCTGTCCTTGACCCACAATATGGGATGCATGTATGGCCCTGTGCAGTGGTATTAGCACAATATGTGTGGACACATAGGGAAGAGCTGATGCACAAAACAGTGCTAGAGCTTGGGGCTGGCGTGAGTTTACCTGGTGTGGTGGCAGCAAAGTGTGGGGCACAAGTGATCTTGTCAGACAGTGCAGAACTTCCACTGTGTCTGGAGAACTGTAGGCGCACCTGTGAAGTGAATGAACTGCCCAATGTGCTTGTGGTGGGTATTACCTGGGGAGAAGTCTCCCCAGACCTTCTGCTCCTCCCTCCATTAGACATCATCTTGGGATCAGACGTTTTCTATGAGCCGCAAGatttTGAAAATGTCCTGGTGACCATCTCCTTCCTCTTGAGAAAAAACCCTGAGGCCCAATTTTGGACAACTTACCAAGAGAGAAGCGCCGACTGGTCCATAGAGGCACTGCTGCACAAATGGAACTTGAAGTGTCTCAACATTCCACTGGAGAAATTCCATGCCAACAAAGATCAACTAGCTGGGTCAACACTTCCTGGAAGCCATACTGTACAAATGATTATAACTGAGGACAAGGAAAGCTGAATGAAAGACAATTGTCAATTTATCCTTCAGTTACTACCAGCAAGGCACATTCAAAGTCAAGACACAATACAAGATCAATGGTTCAAAACTCAATGAATTATAAAATAGTTtaagttgtatagtagtgttctGTTAAAGTTTTAAAATAAAATGATAATCCAAATGTTTTTGAAGACAATTTTTATTAGCTTTCACATTGGACACCTATACAGACTCTTGCAAGGGGGAAAAGGAATGCACAAAGGGCAAGACAGAATGCATTAAACAAAATTAGCCCACCATACTTAGTGCTCTGAATAAGAGAACATTTTAAATTGTTGAAAGACAGGCATTCTACCGATGGTGAATTTGTAGCAGCCATTTAAGTTGGCCACCATCACAGCATTGTAGCCACAGGGGCATTCCGGAGAACACTGGAAACAGCCAAGCACTGCAACACGCCACCTTAACAGCTAACCAGCAATACTCAACTGCTACACAACTGCGCCTAgtgca

Function

symbol description
mettl23 Predicted to enable methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human METTL23 (methyltransferase like 23).

NR:

description
methyltransferase-like protein 23

GO: NA

KEGG:

id description
K23151 METTL23; methyltransferase-like protein 23

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558296.2 False 1453 mRNA 0.43 5 46483136 46485100
XM_036941299.1 True 1289 mRNA 0.43 5 46483352 46485100

Neighbor

gene id symbol gene type direction distance location
LOC110485193 LOC106601421 coding upstream 146750 46302751 ~ 46336386 (+)
LOC110486574 LOC106606976 coding upstream 188668 46274324 ~ 46294468 (+)
LOC110486573 LOC106601414 coding upstream 210766 46257363 ~ 46272370 (+)
LOC110486571 nupl coding upstream 252753 46228993 ~ 46230383 (+)
LOC110486572 LOC106601412 coding upstream 257379 46219879 ~ 46226688 (+)
LOC110486580 mfs11 coding downstream 3000 46488100 ~ 46493732 (+)
LOC110486584 LOC106606957 coding downstream 8846 46493946 ~ 46509241 (+)
foxj1a LOC106601528 coding downstream 57092 46542192 ~ 46547913 (+)
LOC110486588 LOC106602603 coding downstream 74708 46559808 ~ 46565672 (+)
LOC110486589 LOC106606959 coding downstream 86142 46571242 ~ 46672347 (+)
G1180193 NA non-coding upstream 7057 46471918 ~ 46476079 (+)
G1180133 NA non-coding upstream 41042 46390479 ~ 46442094 (+)
G1180161 NA non-coding upstream 51914 46426920 ~ 46431222 (+)
G1180093 NA non-coding upstream 134285 46347560 ~ 46348851 (+)
G1180071 NA non-coding upstream 184685 46298211 ~ 46298451 (+)
G1180200 NA non-coding downstream 12370 46497470 ~ 46497708 (+)
G1180205 NA non-coding downstream 39098 46524198 ~ 46525268 (+)
G1180210 NA non-coding downstream 53208 46538308 ~ 46538685 (+)
G1180211 NA non-coding downstream 53679 46538779 ~ 46539131 (+)
G1180047 NA other upstream 209535 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 306574 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 953008 45529398 ~ 45554103 (+)
G1179362 NA other upstream 1020193 45462588 ~ 45462943 (+)
G1181472 NA other downstream 889063 47374163 ~ 47374477 (+)
tmem100a LOC106606948 other downstream 983016 47468012 ~ 47471205 (+)
G1181636 NA other downstream 1064179 47549279 ~ 47549548 (+)
G1181955 NA other downstream 1257261 47742361 ~ 47743064 (+)
G1182153 NA other downstream 1634513 48119613 ~ 48122575 (+)

Expression


Co-expression Network