LOC110486591 (LOC106606947)


Basic Information

Item Value
gene id LOC110486591
gene name LOC106606947
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47395330 ~ 47400760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558311.2
TTTAAGGCTTTAACCGTGAGGTGCTGGAGTCGGTGTATAGCAACAGCCTGCATACCCAAGGATCGGAGTAAAGTGACAGTCTCAGCTCTGTGTCGTACCCACTATGTTGTGGACAGTGAGTCTCTGCCTCCTGTTGGCCGCGTCCTCTTCAGGTGTACCGCTGGATAGATACAGCACCAAAGGCCAGCATAAAGTACTGCTCGTCTCCTTCGATGGCTTCAGGTGGGACTATGACCGCGATGTGGACACGCCGAATCTGGACACAATGGCCAAAGACGGGGTCAAGGCCAGATATGTGACCCCACCTTACCTCACCATCACCAGTCCCACACATTTCACCCTCCTAACAGGGCGCTACATTGAAAACCATGGGGTGATCCACAACATGTGGTTCAACATCACCACCAGTGAGAAACTGCCTTACTATGCTACCCAGTTTAAGAATGAGTGGTGGGACAACGGCACTCTACCCATCTGGATCACAGCCCAGAGACAGGGCCTGAGGGCCGGCTCTCTTCACTTTCCTGGCACGCAATCCACCTACCAGGGAGAGACGCAGACAGTGAAGGAAGTGGAACCACGGTTTTATGACTACAAAAACGAGACAAAATGGCAAGAGAACGTAGAGAAGGTGATGGGCACCTGGTTCAGTGAGATGGACCTGGACTTTGTGTCACTGTATTTTGGGGAGCCTGATGGCACAGGCCACAAATACGGGCCTGATTCCCCTGAGCGGAGGGAGATGGTCAAGCAGGTGGACAGAACAGTGGGCTACATCCGCAGCTTGGCTGAACAAAACGGACTTGCCGATAGtctcaacatcatcatcaccgcTGACCATGGGATGAGCAATGTGTACCGCAACGGCTTGGTGAAGGAGATCACCCTTTCCAGGATCCCCGGATTCTCCTTCAGAGATATAGCCTTTCACCTGGTGGACTTTGGGCCCTCTGGGATGCTGCTTCCCAAGAAGGGCATGCTGGATAAGGTCTACAACGCCCTGAAGGGGGCGCACCCtcaccttcatgtcttcaagaaGGAGGAGATGCCCAAGCGCCTTCACTTTGCTAATAACAACCGCATCCTACCCATCATTCTCTTCTCTGACCCTGGATATGTCATTAACGGGTTCCTCCCAGTGCAGTTCAACGTGGGGGAGCATGGCTTTGACAACGAAGAAATGGACATGAAGCCCTTCTTCAGAGCTGTGGGCCCGGCGTTCCAAAAGAACCTGGAGGTGGGCCCCTTTGAGACAGTGAACATATACCCCTTGATGTGTCACGTACTGGGCATCAAGCCTGATCCCAATGATGGCCACCTGGATGCCACAAAACACATGCTGGTCTCTGCCAAAGAGGACCTCCGTCAGGACATAAAATCAAATATCTTTGTTGGATTGGCAGCAGTGGCTGGATTTATTGTTGTGGTCTTCATAGCTGTTGTGTCATTTAATGCATTCAAGAAGGAGAAAAATGATAGAAGCTCTGAGAAGTCAGTGCTTCCAGGGGGAAAGGAAGTGACTCAAACTGCCCTTTAAACTGCACCCCAAGTGAAAtctgaaatggataaacaaaggGACGTCACTACTTATGACATACACCCTAAAAACCACCTCATCACAGACTAGTGCATCCCCTCCATGTTGAGACTGACACCCTGCAGACTGACCAGAGAGCTTTTTTTCCTTGTGAATGTAAGCCCCTACAGTCACCATGCCACCTGGGACAACTTATGCTTATGACATTTTCTAAAAGGATGTATTTTCTAAACAATGATTGGTGCCATGATACACTGAGATCAGTAGACTCCAGCTACACTAAAAGAACACATCTGAAACTAAGTCACTGGACAAAACCAGTTCAAAAAGTGACAAATTGTATACTCTGACATCAGTGCATACATGCATTATATGAAAGATGGAAATCAGAAATGGATTTATAATTAAACTAGTTATATTTTTCAAAATCCTGTCAACTAACaaaataattgtttgtgtttctgttctGGATGGCAGTGAGTGAGTGGAGTGAACCTATAGGTTTCTGTATAAATAAGTTATATAAATAAAGTAATGGAAATACC

Function

NR:

description
ectonucleotide pyrophosphatase/phosphodiesterase family member 7-like

GO: NA

KEGG:

id description
K12354 ENPP7; ectonucleotide pyrophosphatase/phosphodiesterase family member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558311.2 True 2082 mRNA 0.48 6 47395330 47400760

Neighbor

gene id symbol gene type direction distance location
LOC118938083 NA coding upstream 572352 46818538 ~ 46822978 (+)
LOC118938555 NA coding upstream 578331 46816007 ~ 46816999 (+)
LOC110486589 LOC106606959 coding upstream 722983 46571242 ~ 46672347 (+)
LOC110486588 LOC106602603 coding upstream 829658 46559808 ~ 46565672 (+)
foxj1a LOC106601528 coding upstream 847417 46542192 ~ 46547913 (+)
LOC110486592 LOC106606958 coding downstream 3014 47403774 ~ 47410322 (+)
tmem100a LOC106606948 coding downstream 67252 47468012 ~ 47471205 (+)
LOC110486595 paqrb coding downstream 81478 47482238 ~ 47505989 (+)
LOC110486605 tmem220 coding downstream 430161 47830848 ~ 47832931 (+)
LOC110486603 LOC106606941 coding downstream 432474 47833234 ~ 47836337 (+)
G1181480 NA non-coding upstream 15295 47379800 ~ 47380035 (+)
G1181474 NA non-coding upstream 20253 47374775 ~ 47375077 (+)
G1180845 NA non-coding upstream 463168 46929524 ~ 46932162 (+)
G1180844 NA non-coding upstream 466932 46928182 ~ 46928398 (+)
G1180776 NA non-coding upstream 567647 46810424 ~ 46827683 (+)
G1181539 NA non-coding downstream 25227 47425987 ~ 47426300 (+)
G1181547 NA non-coding downstream 29542 47430302 ~ 47430538 (+)
G1181552 LOC106580481 non-coding downstream 31635 47432395 ~ 47433957 (+)
G1181569 NA non-coding downstream 42631 47443391 ~ 47443708 (+)
G1181472 NA other upstream 20853 47374163 ~ 47374477 (+)
LOC110485193 LOC106601421 other upstream 1059052 46302751 ~ 46336386 (+)
G1180047 NA other upstream 1121729 46239144 ~ 46273601 (+)
LOC118936304 LOC106601427 other upstream 1218768 46173911 ~ 46176562 (+)
LOC110485192 LOC106601391 other upstream 1865202 45529398 ~ 45554103 (+)
G1181636 NA other downstream 148519 47549279 ~ 47549548 (+)
G1181955 NA other downstream 341601 47742361 ~ 47743064 (+)
G1182153 NA other downstream 718853 48119613 ~ 48122575 (+)
G1182354 LOC106601550 other downstream 1155254 48556014 ~ 48561624 (+)

Expression


Co-expression Network