LOC110486597 (LOC106606951)


Basic Information

Item Value
gene id LOC110486597
gene name LOC106606951
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 47565257 ~ 47597295 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941316.1
TTCTCCtaccctttctctctgtgtcgcGGCGCTGGGTTGGAGCCGCTTTCCCTGGTCTGGCACGTTCCCTTAAATTTTTGTGTTAAATTTGatgccccccccccattttttgaTTCGACAATTTGCGACGGCATTTAAAATACCTACACGGGCATCTCCATACCGGTGTTTTTTTTATAAGCATTTGTCAAATATACAATTTATCCTGTAAAATGGCGGTGTTAAGCGGGTCGTCTGGGCCGGTTGCCCGGCTTGAGGGCCGTGAATTCGAATACTTGATGAAAAAGCGCTCGGCGACTATCGGTAGGAACTCGTCTCAGGGCTCGGTGGATGTGAGCATGGGTCATTCCAGTTTTATTTCTCGAAGACATCTCGAAATATTCACTGTTAGTGACGATAGCACTGGTGGTGGAGACTTCTACTTGCGATGCCTCGGCAAAAACGGGGTGTTCGTGGATGGAGTGTTCCTCAGACGGGGTGCCCCTCCTCTACAACTACCACGAATGTGCATTTTCAGGTTTCCCAGCACAAACATCAAGATCACATTCACAGCCCTGTCCACTGGGAAAAGGGAGAAGCGTGAGGCGCCTGAGTCTCCGGTAAAACCAGTCCACATCTCTCCACTCACCATAAACATTCCAGACAACATCGCCCACCTCATGAGCCCCCTGCCCTCACCCACCGGCACCATCAGTGCTGCCAACTCGTGCCCCTCCAGTCCCAGGGGAGCGGGCTTGTCCGGCTACAGGATGGGTCGCATCGTCAGCTCTGCAGAGCTACAGCTCATTAATGACAACTCCCAGTCAGAGAACGACAAGGAGGCCTCAGGAGGGGACAGCCCCAAGGATGATTCCAAACCGCCATACTCATATGCACAACTGATAGTCCAAGCCATTACAATGGCACAGGACAAGCAGCTCACGCTAAACGGAATATATACTCACATCACCAAAAACTACCCCTACTACAGGACTGCAGACAAAGGCTGGCAGAACTCGATCCGTCACAATCTGTCACTGAACCGCTACTTTATTAAAGTAGCCAGATCGCAGGAGGAACCGGGCAAGGGCTCGTTCTGGAGGATAGACCCGTCCTCAGAGGGCAAGCTCATGGAGCAGGCCTTCAGGAAACGAAGGCCACGGGGTGTGCCCTGCTTCAGGACCCCCCTCGGACCCCTCTCCTCCAGGAGTGCCCCAGTCTCCCCTAATCACTCTGGGGTGCTCTCGGCCCACTCGAGTGGGGTGCAGACCCCTGACAGCCTATCCCGAGAAGGTTCCCCTGTCCCCATGGAACCAGAGCCCGCTCCGGCCCCGCCCCCTTCCACAGCAGTCCAGCCCAAACTAGCTGTCATCCAGGAGGCCCGCTTTGCACAGAGTACACCAGGCTCCCCTCTCAACAGCCAGCCGGTGCTCATCACGGTTCAGCGTCAGTTACCTCAGACCCTAAAGCCGGTGACCTATGCCATGGCCACACCTGTGACTACCAGCACCAACCAGAACCAGCAGCCCGTCATGCAGACGGTGCACGTCGTCCACCAGATCCCTGCCATGTCTGTCACCAGCGTGTCCGGGCTCAGCACCGCCAACACCTACACAGTGGCCACCCCCACCATGGTCACCCTCCAGGCTGAGCCCCAGGAGAACGGAGACTACTCAGAGGCCAAAGTAAAAGTAGAATCTGTTCCAACGATCACCCACGCCTCTATAGGCGGTGGCAGTCGCATCATCCAGACGACCCAGTCGGCCACGCCCTTACAGACGCTAACCTTAGTGCAGCAGCCCCTGGGCCAGCACCAGCTCCCCATAAAGACCATCACACAGAATGGCACCCACCTGATGCCAATGCAGGCTGCTGCAGCCACAGCTGTTGCGAGTCCTCTCCACTTGCTGGCCACTCACGCCTCCGCTTCAGCCTCCCTCCCGACCAAACGACAGAACGGAGCCCAGGCGGCCAGCGATCAGCCCAACGCTAAGCGCATCAAAACAGAGGAAGGGGACAGCGCCACCCCCACCGCAACACGCGCAGCAGATACGGACTCGTCGGCAGCCAATGACCAAGCCAGCCACCACAACTAGTCTTCTGCATCATCACCACCGTCTTGTTGTTTTTTCTCTCCTTTCCTACCATTTATTTTCCCCTTCTTCCATTGACTCCCAAGGTGCCAAAAGGAGAAGATTTTCAGTTGGTTTAACCATTGTAGAGGACTGGAAAATATGACCACCCCTTTAAAAAAGACTGAAGAGAACATTTAGTTGAGATTTGAAAGAAGGACAACTAGGACAAAGAAGAACTCTAATTTGAAGGTCCCCCTGTGAGACATCGCCACGGAGGAGGATGACGACGACTACTCCAAGACCACAGGAAGCCTTAACAACAATTAACCTTTAACATGATGAGCTGAACTTTGACCACCTGCAGCGAGCAGTTTGACTGAGGCCCATGTTAGCCCGGCGGTCGCACGGCACCTCTGCCTCAACTACCTCAGTGCAGATTGGGGGCCACGGTCAAGGGCACCACTCAACGGACCCATGGGATGACTGGATGAGGTGACCAACTAGCAGCATGACAAGCATTTGACGCAGACATGAAATATCAATGAGTGCATTCAGAAAAAGGGATCAAAACAGTCGGAGCCAATTCCTGGACCTTTGGCAGCTAGCCTTTCATATACTGACCTAGCCTTATTGCAGCTCTAAGTAGTAATGCAGTATTTTGTCATTCATATGTGGACCATAGGATCTGTTTTGGATGTATTTTCATTTATATAGGTAAAAAAAAGTGCTAATAATTGAAATAAAGAAAGCATTACAGCAGTGGGGTCTAACATTTCAATCACTCCACCTGAACTTCAACGTTCTCGCTGTTACTTTGTATGTGGACTTTTTTTCTGTTCAGTGTCGTTTCTTTTTACAATTCTATCAATGGGGTGttttttttacccccccccccatgttaaATCCACATTCTGTCATATCCAAATCAATTTTCTTTGCTACACTTACATATTTTCATACTTGCACAGATAACCAGTAAGATATAAACATATTAATTCCATGTGTAGTTGATCAGATGCCTCCTCATCGAACTTTCATGTAACAGACTACAGAAAAGTACCTGAGCCGTTAACGTGTGAATCCTTAGTTGAAACTATACCAAAGGGGTCACTCCACCTgtttttggtaaaaagctgagggatgggcctggagaaatggaaCCACTCTCAGATTGACAGACGGGACATGATATCACAATTgtggttttaaccatgttttgagactATACCGTGATTTACATttccattgtttacaaacattagcGTAAGAACAAGTTTATGATGGGGTACgagagttgaactaagctcattagGCGTTTTATAAGTTATTATTCAAGATTAGATGggtatatatcattaatttaagtcagaaaatggatgtagcaactaaggattctagctttaactgTACATTTAACAGAAGAAAAGAGCTGTTTAAAACCAGACCAGATCTGCACTTggtaaaatgtgtttttgtttctcTCGTTATCCTTGGCTGTGGTGACTTCGGTGTGTGGACAGACCCTTTGCTTGATTATTTCATTCTGTTCCGACAACCTGACGAGTCTGTCTTCAGATTGTATATGTTCCAAACTAAAGAAGATACAAGTGATGGATATTTGTTCTGCTTCAGTGGAtaaatgattttttttattttatataaattAATTTAAAACCTTT

Function

NR:

description
forkhead box protein K2-like

GO: NA

KEGG:

id description
K09404 FOXK; forkhead box protein K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941316.1 True 3733 mRNA 0.49 9 47565257 47597295

Neighbor

gene id symbol gene type direction distance location
LOC110486596 LOC106606950 coding downstream 42540 47508924 ~ 47522717 (-)
LOC110486594 LOC106601485 coding downstream 98522 47460436 ~ 47466735 (-)
LOC110486593 LOC106606954 coding downstream 131308 47432406 ~ 47433949 (-)
LOC110485195 LOC102192139 coding downstream 219323 46929363 ~ 47345934 (-)
LOC110486590 LOC105022923 coding downstream 650299 46827752 ~ 46915018 (-)
LOC110486599 NA coding upstream 10378 47607673 ~ 47611494 (-)
LOC110487550 LOC106601487 coding upstream 14986 47612281 ~ 47614372 (-)
LOC110486600 LOC106606953 coding upstream 41279 47638574 ~ 47707551 (-)
LOC110486601 rnz2 coding upstream 208929 47806224 ~ 47815064 (-)
LOC110486602 map2k4 coding upstream 220423 47817718 ~ 47830777 (-)
G1181687 NA non-coding downstream 1694 47563071 ~ 47563563 (-)
G1181735 NA non-coding downstream 21522 47543492 ~ 47543735 (-)
G1181727 NA non-coding downstream 29483 47535544 ~ 47535774 (-)
G1181722 NA non-coding downstream 33382 47531640 ~ 47531875 (-)
G1181720 NA non-coding downstream 36714 47528278 ~ 47528543 (-)
G1181913 NA non-coding upstream 111425 47708720 ~ 47709006 (-)
G1181931 NA non-coding upstream 128002 47725297 ~ 47725589 (-)
G1181958 NA non-coding upstream 147710 47745005 ~ 47745348 (-)
G1181974 NA non-coding upstream 156947 47754242 ~ 47754535 (-)
G1181977 NA non-coding upstream 159345 47756640 ~ 47756867 (-)
LOC110486586 ubald2 other downstream 1029612 46510585 ~ 46535713 (-)
G1179621 LOC106607015 other downstream 2032595 45531858 ~ 45532662 (-)
LOC110486618 LOC106606909 other upstream 405736 47999581 ~ 48015951 (-)
G1183013 NA other upstream 427806 48025101 ~ 48025776 (-)
G1183126 NA other upstream 662229 48259524 ~ 48259989 (-)
G1183190 NA other upstream 764303 48361598 ~ 48365100 (-)
G1183192 NA other upstream 766761 48364056 ~ 48376966 (-)

Expression


Co-expression Network