Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938615 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48444262 ~ 48444392 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035822.1 | True | 131 | mRNA | 0.47 | 1 | 48444262 | 48444392 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486633 | rl3 | coding | downstream | 17940 | 48421651 ~ 48426322 (-) |
| LOC118938627 | NA | coding | downstream | 19929 | 48424240 ~ 48424333 (-) |
| LOC118938629 | NA | coding | downstream | 21183 | 48423000 ~ 48423079 (-) |
| LOC118938618 | NA | coding | downstream | 22264 | 48421867 ~ 48421998 (-) |
| LOC118936490 | LOC106601559 | coding | downstream | 191757 | 48249930 ~ 48252505 (-) |
| LOC118938630 | NA | coding | upstream | 1002 | 48445394 ~ 48445473 (-) |
| LOC118938628 | NA | coding | upstream | 2245 | 48446637 ~ 48446730 (-) |
| LOC110486634 | LOC106601558 | coding | upstream | 7233 | 48451625 ~ 48475721 (-) |
| LOC110486641 | bcat1 | coding | upstream | 61871 | 48506263 ~ 48514910 (-) |
| LOC110486643 | LOC106606926 | coding | upstream | 77677 | 48522069 ~ 48529995 (-) |
| G1183217 | NA | non-coding | downstream | 12759 | 48428988 ~ 48431503 (-) |
| G1183194 | NA | non-coding | downstream | 14177 | 48368061 ~ 48430085 (-) |
| G1183195 | NA | non-coding | downstream | 62441 | 48373657 ~ 48381821 (-) |
| G1183190 | NA | non-coding | downstream | 82243 | 48361598 ~ 48365100 (-) |
| G1183142 | cacng2 | non-coding | downstream | 162359 | 48280020 ~ 48281903 (-) |
| G1183212 | NA | non-coding | upstream | 43356 | 48487748 ~ 48488246 (-) |
| G1183223 | rund1 | non-coding | upstream | 46421 | 48490813 ~ 48493597 (-) |
| G1183222 | rpl27 | non-coding | upstream | 52316 | 48496708 ~ 48498597 (-) |
| G1183224 | NA | non-coding | upstream | 72329 | 48516721 ~ 48519707 (-) |
| G1183318 | LOC106601548 | non-coding | upstream | 174609 | 48619001 ~ 48621604 (-) |
| G1183196 | NA | other | downstream | 54544 | 48379267 ~ 48389718 (-) |
| G1183192 | NA | other | downstream | 67296 | 48364056 ~ 48376966 (-) |
| G1183126 | NA | other | downstream | 184273 | 48259524 ~ 48259989 (-) |
| G1183013 | NA | other | downstream | 418486 | 48025101 ~ 48025776 (-) |
| G1183337 | NA | other | upstream | 223396 | 48667788 ~ 48668082 (-) |
| LOC110486656 | syt3 | other | upstream | 453287 | 48875671 ~ 48936482 (-) |
| LOC110485205 | LOC106597701 | other | upstream | 528791 | 48959315 ~ 49053966 (-) |
| setd1a | LOC106585476 | other | upstream | 911986 | 49346540 ~ 49361234 (-) |
| LOC110486687 | LOC106601611 | other | upstream | 1042534 | 49486817 ~ 49504819 (-) |
