Gene
RNA
| Item | Value |
|---|---|
| gene id | ifi35 |
| gene name | LOC106606925 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48500511 ~ 48506208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| interferon-induced 35 kDa protein homolog isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021558400.2 | False | 1785 | mRNA | 0.47 | 9 | 48500511 | 48506208 |
| XM_021558398.2 | True | 1808 | mRNA | 0.47 | 10 | 48500525 | 48506208 |
48,498,000
48,499,000
48,500,000
48,501,000
48,502,000
48,503,000
48,504,000
48,505,000
48,506,000
48,507,000
48,508,000
48,509,000
48,510,000
48,511,000
48,512,000
48,513,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486640 | LOC106601555 | coding | upstream | 1836 | 48496613 ~ 48498675 (+) |
| LOC110486639 | rund1 | coding | upstream | 6992 | 48488445 ~ 48493519 (+) |
| LOC110486632 | LOC106601556 | coding | upstream | 14126 | 48475804 ~ 48486385 (+) |
| LOC110485200 | cacng2 | coding | upstream | 139642 | 48279842 ~ 48360869 (+) |
| LOC110486626 | LOC106606914 | coding | upstream | 268574 | 48219979 ~ 48231937 (+) |
| LOC110486644 | LOC106601551 | coding | downstream | 26302 | 48532510 ~ 48540487 (+) |
| LOC110486647 | LOC106601548 | coding | downstream | 92770 | 48598978 ~ 48622758 (+) |
| LOC110486650 | akts1 | coding | downstream | 191995 | 48698203 ~ 48704379 (+) |
| LOC110486653 | LOC106601538 | coding | downstream | 241807 | 48748015 ~ 48796028 (+) |
| LOC110486658 | NA | coding | downstream | 451569 | 48957777 ~ 48959202 (+) |
| G1182334 | NA | non-coding | upstream | 21901 | 48470203 ~ 48478610 (+) |
| G1182317 | NA | non-coding | upstream | 27840 | 48469378 ~ 48472671 (+) |
| G1182318 | NA | non-coding | upstream | 33103 | 48464880 ~ 48467408 (+) |
| G1182331 | NA | non-coding | upstream | 38357 | 48454291 ~ 48462154 (+) |
| G1182341 | NA | non-coding | downstream | 9876 | 48516084 ~ 48516283 (+) |
| G1182342 | NA | non-coding | downstream | 10373 | 48516581 ~ 48520449 (+) |
| G1182344 | NA | non-coding | downstream | 22706 | 48528914 ~ 48529433 (+) |
| G1182350 | NA | non-coding | downstream | 30619 | 48536827 ~ 48537060 (+) |
| G1182359 | NA | non-coding | downstream | 57609 | 48563817 ~ 48564807 (+) |
| G1182153 | NA | other | upstream | 377936 | 48119613 ~ 48122575 (+) |
| G1181955 | NA | other | upstream | 757447 | 47742361 ~ 47743064 (+) |
| G1181636 | NA | other | upstream | 950963 | 47549279 ~ 47549548 (+) |
| tmem100a | LOC106606948 | other | upstream | 1030499 | 47468012 ~ 47471205 (+) |
| G1181472 | NA | other | upstream | 1126034 | 47374163 ~ 47374477 (+) |
| G1182354 | LOC106601550 | other | downstream | 49806 | 48556014 ~ 48561624 (+) |
| G1182541 | NA | other | downstream | 440541 | 48946749 ~ 48947969 (+) |
| G1182555 | NA | other | downstream | 471792 | 48978000 ~ 48981403 (+) |
| G1182595 | NA | other | downstream | 557577 | 49063785 ~ 49065142 (+) |
| G1182629 | NA | other | downstream | 608767 | 49114975 ~ 49118697 (+) |
