LOC118938635


Basic Information

Item Value
gene id LOC118938635
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48958678 ~ 48958765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035842.1
TTTCTCCTGTGATGTTTTGCACTGGGCTCTGAATATCTGTGGCGATAAGGTGCTCTCTGGCTCTGACAGGCTTGAGTCTGAGGAGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035842.1 True 88 mRNA 0.50 1 48958678 48958765

Neighbor

gene id symbol gene type direction distance location
LOC118938636 NA coding upstream 168 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 402 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 162650 48748015 ~ 48796028 (+)
LOC110486650 akts1 coding upstream 254299 48698203 ~ 48704379 (+)
LOC110486647 LOC106601548 coding upstream 336488 48598978 ~ 48622758 (+)
LOC110486662 LOC106606881 coding downstream 141242 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 176186 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 240081 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 251700 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 304764 49263529 ~ 49266771 (+)
G1182542 LOC106595301 non-coding upstream 2119 48949888 ~ 48956559 (+)
G1182540 NA non-coding upstream 13711 48944407 ~ 48944967 (+)
G1182492 NA non-coding upstream 79433 48875674 ~ 48879245 (+)
G1182521 NA non-coding upstream 83333 48875070 ~ 48875345 (+)
G1182498 NA non-coding upstream 138357 48817217 ~ 48820321 (+)
G1182550 LOC106594513 non-coding downstream 13109 48971874 ~ 48973071 (+)
G1182554 NA non-coding downstream 18751 48977516 ~ 48977900 (+)
G1182556 NA non-coding downstream 22789 48981554 ~ 48982061 (+)
G1182557 NA non-coding downstream 26409 48985174 ~ 48985475 (+)
G1182560 NA non-coding downstream 30904 48989669 ~ 48989912 (+)
G1182541 NA other upstream 10709 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 397054 48556014 ~ 48561624 (+)
G1182153 NA other upstream 836103 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1215614 47742361 ~ 47743064 (+)
G1181636 NA other upstream 1409130 47549279 ~ 47549548 (+)
G1182555 NA other downstream 19235 48978000 ~ 48981403 (+)
G1182595 NA other downstream 105020 49063785 ~ 49065142 (+)
G1182629 NA other downstream 156210 49114975 ~ 49118697 (+)

Expression


Co-expression Network