Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487553 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49079125 ~ 49081022 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002468288.2 | False | 448 | mRNA | 0.46 | 3 | 49079125 | 49081022 |
| TU1349695 | True | 367 | lncRNA | 0.47 | 3 | 49079132 | 49080948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486659 | LOC106601577 | coding | downstream | 957 | 49065331 ~ 49078168 (-) |
| LOC110485205 | LOC106597701 | coding | downstream | 25159 | 48959315 ~ 49053966 (-) |
| LOC110486657 | LOC106595301 | coding | downstream | 122555 | 48946728 ~ 48956570 (-) |
| LOC110486656 | syt3 | coding | downstream | 142643 | 48875671 ~ 48936482 (-) |
| LOC110486655 | LOC106601541 | coding | downstream | 206278 | 48858248 ~ 48872847 (-) |
| LOC110486660 | LOC103034594 | coding | upstream | 411 | 49081433 ~ 49096321 (-) |
| LOC110486661 | LOC106606886 | coding | upstream | 23080 | 49104102 ~ 49113258 (-) |
| LOC110486665 | LOC106601588 | coding | upstream | 33936 | 49114958 ~ 49130957 (-) |
| LOC110485206 | LOC106606476 | coding | upstream | 58071 | 49139093 ~ 49180323 (-) |
| LOC110486668 | armc5 | coding | upstream | 122024 | 49203046 ~ 49209637 (-) |
| G1183473 | NA | non-coding | downstream | 34352 | 49044511 ~ 49044773 (-) |
| G1183470 | NA | non-coding | downstream | 50959 | 49027962 ~ 49028166 (-) |
| G1183469 | NA | non-coding | downstream | 51223 | 49027596 ~ 49027902 (-) |
| G1183468 | NA | non-coding | downstream | 54340 | 49024561 ~ 49024785 (-) |
| G1183463 | NA | non-coding | downstream | 60534 | 49018334 ~ 49018591 (-) |
| G1183493 | NA | non-coding | upstream | 18714 | 49099736 ~ 49101884 (-) |
| G1183515 | NA | non-coding | upstream | 62233 | 49143255 ~ 49144184 (-) |
| G1183512 | NA | non-coding | upstream | 87664 | 49168686 ~ 49169344 (-) |
| G1183273 | NA | non-coding | upstream | 214154 | 49295176 ~ 49299864 (-) |
| G1183567 | NA | non-coding | upstream | 236260 | 49317282 ~ 49317483 (-) |
| G1183337 | NA | other | downstream | 411043 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 608142 | 48435826 ~ 48470983 (-) |
| G1183196 | NA | other | downstream | 689407 | 48379267 ~ 48389718 (-) |
| setd1a | LOC106585476 | other | upstream | 275356 | 49346540 ~ 49361234 (-) |
| LOC110486687 | LOC106601611 | other | upstream | 405904 | 49486817 ~ 49504819 (-) |
| LOC118938314 | NA | other | upstream | 456177 | 49537199 ~ 49544276 (-) |
| G1183706 | NA | other | upstream | 604316 | 49685338 ~ 49688456 (-) |
| LOC110486698 | LOC106601594 | other | upstream | 754641 | 49831067 ~ 49853671 (-) |
