LOC110486660 (LOC103034594)


Basic Information

Item Value
gene id LOC110486660
gene name LOC103034594
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49081433 ~ 49096321 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941382.1
CCCCTGAACAACACGGCCCTTTTTAAGTTCAGtgggggaagagaaagggggacTCTGAAATACGAAGACAAAAAGACACTAAACAGACCTGAAAGGGCCCTGTCTTCTACACGGGAAGACTATTGTCAAATCAAAGCAACACGAAACGAAGGTCTTGACTGCCTGAACcacgacaaaaaaaaaaatattaaaatggcgGAGCCGGACAAATTAAACATCGACTCCATAATACAGCGTCTTCTGGAAGttAAGGGCTCTCGGCCAGGCAAGAACGTTCAGCTGACAGAGAACGAGATCCGTGGCCTTTGCCTCAAGTCTCGCGAAATCTTCCTCAGCCAGCCAATCCTGCTCGAGCTTGAGGCACCACTCAAGATCTGCGGTGACGTCCATGGTCAGTACTACGACCTGCTGCGGCTGTTTGAGTACGGAGGTTTCCCCCCGGAGAGCAACTACCTGTTCCTAGGGGACTACGTGGACCGGGGGAAGCAGTCCCTGGAGACCATCTGCTTGCTTCTGGCCTACAAGGTCAAATACCCAGAGAACTTCTTCTTGCTGCGCGGCAACCACGAGTGTGCCTCCATTAACCGTATCTATGGCTTTTATGACGAGTGTAAGAGACGGTATAACATCAAGCTGTGGAAGACTTTCACAGACTGCTTCAACTGTTTACCCGTGGCTGCCATTGTAGATGAGAAGATCTTCTGCTGCCATGGAGGCctctctccagacctccagtCCATGGAGCAGGTGCGCAGAGTGATGCGACCCACAGATGTGCCTGACCAGGGCCTGCTGTGTGACCTGCTGTGGGCCGACCCAGACAAAGATGTCCTGGGCTGGGGCGAGAACGACCGCGGGGTCTCTTTCACATTCGGGGCAGACGTGGTGGCCAAATTTCTGCACAAACACGACATGGACCTTATATGCAGGGCACATCAGGTGGTAGAAGACGGTTACGAGTTCTTTGCAAAGAGACAGCTTGTTACTCTGTTCTCTGCCCCTAACTACTGTGGAGAGTTTGATAATGCCGGTGCCATGATGAGTGTGGATGAGACCCTCATGTGTTCCTTTCAGATTCTCAAGCCAGCGGATAAGAAGCTCTACTCttatggtggaggtggaggaatgGGATCTGGACGCCCCGTCACCCCACCACGGAATTCCGCCAAAGGCGGAAAGGCCAAGAAATAACACCCACTGGACCCCCCTCCTTGAACCAAGCACCCCCCCCACACTATTTTGCCCTACTTTTTCCCTCATCACCAAACAGCAACAAAGCAGACAGTACCTAGGGTTCGGTCCTCTTTTTCTCTGATACTGTTTTTAACTGTTTGAGTGTATGTATGTCCGTGTGTCTGAAAGAGAGGTTTATTGTATTCTGTTTGTATGTCCTTcctttcccctgctctgttctccTGTCACTTTGTAGATGAAATTGGTCCTTCCTTTCAGTGATGTAAATGCACAcctgggggggaggaggggaaaggagccTTTACTGTTTGTTAGGGCCCTGCACTGTTTTGATGCTCAACACAAGCTTTTGTACATCCTgtttgagaggtgtgtgtgtgtgggtcaatGGGGTCAATCTGCATGGTCAAATGGTAACAAcggcacacaccacacactgagaGCACAGGTGGATATGTGCAGATGGACCCTTTTAGTTTATGGATTCACAAAGATCAAGAAGCGGAcacgtttattttttttctctcccaaaaACCAATGATTTGAAAACGCAATCATGGATGTGAAATAGttttgcttttctgttttttttgttgtttttttgtagaTGCATAAAAAAAAGGTTTGAATCCTTGAGTTTTAGTTTATTTGGAAGCCGATGATTAATAAAGAACCATTTATTTAAAATATTCCATCACACTGTTCACTATGTTCACCTCACCATTGCTTTGATATTTGTTTATATATTAAATTCCTCTAACCCACATGTCGAACTCATTCCACAAAGGGTTGCGTTTCCATGGGTTTTtgctccacccttgtacttggtggatgaattaaggtcactaaatAGTAATGAATTTCAGGGATCCagtgtggcgcagcggtctaaggcactgcatctcaatgctagaagagtcactacagtccctggtttgattccaggctgtatcacaaccagccgtgagtgggagtcccatagggcggcgaacaattggcccagtgtcgtccgcgTTAGTGTTTGGCCGGgataggacgtcattgtaaagaatttgttcttaactgacttgcctagttacattcgGCCCTTCATgcaatgagtttgacacctctgCTCTACCCCCTTTGTCATTCCCACTTGCTCTTCTCTTGTCTGAACGGTATCGAAAGCTTTGTTTGTTCAGGGTGGGATGTTGGCATAAGTTGCTGGCTCCAAGAAATACCCATTTCCTGTACAGCATTTTGGGGGCTTTTGCTTAGCCATTTTCTATCATCCCCTTAAAATGTGTTCTCCTTGCCCCTATCCTTTAAACACGGTCAATGTTCATCTCTCTGGTTCTCACCCCCCCCAATCTTCCATATTCTGTCTCCCATTTTGCTCAGTAGTTTCCCTCTGGGTTCTGAGTAGTCAAAGAATGTCATACCTCAATTCTCACCCCACTTTGCATCTGTCCCCCCCACCCCTTACTCAGCTCATGTTTTTCTCTTCTCTTTTATATTTAAAGATGTGTAACAACTTGCCAGACAGCATTAATGCTCATTTCCTGTGCTGGATTCTTTCTCACATTTTAGTAGCTAGCTCATATCGGCTTCtagtgctctctcctctccactaggTGGTGCATTTCATACAACACTCACCATTGCGTCATCTCACTGAAGACGGGATCAGGAGTACTGTACATTCAATGCGCCCCAACAGTGCTGAGTGCATTCATGGTGCATAGGCGgcagtatgttttttttaaagagcacATGGCTCAAGGTTTTTTTGCTTTGTAGTTTATAAAGAAAATTGATCATATTGTGAGACCAAGGAGTGTTGGTTTTAATGACGTGTTATGATCTATTGACCAGAGGAAGTGTTATTTGCTGTTAGATAAGGATATTGAATGCTTGATATACAATATGTTACATGGAAAGGTAATACGCTTGTTTTTAAAAGAGCTGTAATATTAGAGAACATTTTGGGTTGGAAAACTTTTTTGCTGATAAAATAACAGGGCAGGAGTTTCGGAATTGTCAATGGCTTGTTTTCTGACAAGGCTTTAAGACAATGATTCAGAGCTGTAATGTAGACCATCTGCAATTTTGTGAAAATATGCATTTTGGAAACAAGCTTTTGCTTACATGCTTTAGGCAGTAGGGTAGAGCAATGCCTGAACTTGAAGATAAATTGTTTTGGGGATCATTGCAGGTCTTAGTATTGCTGTCCAGAATGATACTTCACAACTTCCAATTTCACCCGACCCTACTCTGTTCATAGCAGGGTAAACATTCTGCTTGTAATGTTGGTCAGATCATTAATTTGCTAAAATCATTAAGACATCACCAATCTACTGTAACTATCGATATCTATCTTATTTCTTTTGAACTTTTATTTCAAGAACTAGGGCAATATAGATATTGTGATAATGTAaaacgtttttattttattttaaccaaTCAGGGACGTTTTTCCTTAATGCACTGTCTCTGGGGGCAATACAAGGCCACGTTCAGTTGCCAAACGTTGtcgaacgttgcagatagaaatgccatgAATAGAGCTGATGTGTTCGTATTCGTGTCAAAGGTGTTTGTTCTACATAGCCTATTTCTATCCGAACGTATCACAACGTTAAGTCCTGCTGAACGCGCCCCAGGCTAGAAAAGCTAAAATATAAATGAATCAAAAacgttaaataaaaataaaatgatgttttatttttatgtaatttGTTTTCCAACCAATCACAAAAATCCTGTCTGTTACCGGgtagaaaataaaaaatagtgaATTT
>XM_036941381.1
GCAAATGAAAACATGGGTTCAAAATCAAGCAGTGACCCAATCATCATTGAGTAAATGTAAAGCTCGCCTTAGAGTCAACCCCCTGTCTTCTCGCTTCCCCTGAACAACACGGCCCTTTTTAAGTTCAGtgggggaagagaaagggggacTCTGAAATACGAAGACAAAAAGACACTAAACAGACCTGAAAGGGCCCTGTCTTCTACACGGGAAGACTATTGTCAAATCAAAGAAGCAACACGAAACGAAGGTCTTGACTGCCTGAACcacgacaaaaaaaaaaatattaaaatggcgGAGCCGGACAAATTAAACATCGACTCCATAATACAGCGTCTTCTGGAAGttAAGGGCTCTCGGCCAGGCAAGAACGTTCAGCTGACAGAGAACGAGATCCGTGGCCTTTGCCTCAAGTCTCGCGAAATCTTCCTCAGCCAGCCAATCCTGCTCGAGCTTGAGGCACCACTCAAGATCTGCGGTGACGTCCATGGTCAGTACTACGACCTGCTGCGGCTGTTTGAGTACGGAGGTTTCCCCCCGGAGAGCAACTACCTGTTCCTAGGGGACTACGTGGACCGGGGGAAGCAGTCCCTGGAGACCATCTGCTTGCTTCTGGCCTACAAGGTCAAATACCCAGAGAACTTCTTCTTGCTGCGCGGCAACCACGAGTGTGCCTCCATTAACCGTATCTATGGCTTTTATGACGAGTGTAAGAGACGGTATAACATCAAGCTGTGGAAGACTTTCACAGACTGCTTCAACTGTTTACCCGTGGCTGCCATTGTAGATGAGAAGATCTTCTGCTGCCATGGAGGCctctctccagacctccagtCCATGGAGCAGGTGCGCAGAGTGATGCGACCCACAGATGTGCCTGACCAGGGCCTGCTGTGTGACCTGCTGTGGGCCGACCCAGACAAAGATGTCCTGGGCTGGGGCGAGAACGACCGCGGGGTCTCTTTCACATTCGGGGCAGACGTGGTGGCCAAATTTCTGCACAAACACGACATGGACCTTATATGCAGGGCACATCAGGTGGTAGAAGACGGTTACGAGTTCTTTGCAAAGAGACAGCTTGTTACTCTGTTCTCTGCCCCTAACTACTGTGGAGAGTTTGATAATGCCGGTGCCATGATGAGTGTGGATGAGACCCTCATGTGTTCCTTTCAGATTCTCAAGCCAGCGGATAAGAAGCTCTACTCttatggtggaggtggaggaatgGGATCTGGACGCCCCGTCACCCCACCACGGAATTCCGCCAAAGGCGGAAAGGCCAAGAAATAACACCCACTGGACCCCCCTCCTTGAACCAAGCACCCCCCCCACACTATTTTGCCCTACTTTTTCCCTCATCACCAAACAGCAACAAAGCAGACAGTACCTAGGGTTCGGTCCTCTTTTTCTCTGATACTGTTTTTAACTGTTTGAGTGTATGTATGTCCGTGTGTCTGAAAGAGAGGTTTATTGTATTCTGTTTGTATGTCCTTcctttcccctgctctgttctccTGTCACTTTGTAGATGAAATTGGTCCTTCCTTTCAGTGATGTAAATGCACAcctgggggggaggaggggaaaggagccTTTACTGTTTGTTAGGGCCCTGCACTGTTTTGATGCTCAACACAAGCTTTTGTACATCCTgtttgagaggtgtgtgtgtgtgggtcaatGGGGTCAATCTGCATGGTCAAATGGTAACAAcggcacacaccacacactgagaGCACAGGTGGATATGTGCAGATGGACCCTTTTAGTTTATGGATTCACAAAGATCAAGAAGCGGAcacgtttattttttttctctcccaaaaACCAATGATTTGAAAACGCAATCATGGATGTGAAATAGttttgcttttctgttttttttgttgtttttttgtagaTGCATAAAAAAAAGGTTTGAATCCTTGAGTTTTAGTTTATTTGGAAGCCGATGATTAATAAAGAACCATTTATTTAAAATATTCCATCACACTGTTCACTATGTTCACCTCACCATTGCTTTGATATTTGTTTATATATTAAATTCCTCTAACCCACATGTCGAACTCATTCCACAAAGGGTTGCGTTTCCATGGGTTTTtgctccacccttgtacttggtggatgaattaaggtcactaaatAGTAATGAATTTCAGGGATCCagtgtggcgcagcggtctaaggcactgcatctcaatgctagaagagtcactacagtccctggtttgattccaggctgtatcacaaccagccgtgagtgggagtcccatagggcggcgaacaattggcccagtgtcgtccgcgTTAGTGTTTGGCCGGgataggacgtcattgtaaagaatttgttcttaactgacttgcctagttacattcgGCCCTTCATgcaatgagtttgacacctctgCTCTACCCCCTTTGTCATTCCCACTTGCTCTTCTCTTGTCTGAACGGTATCGAAAGCTTTGTTTGTTCAGGGTGGGATGTTGGCATAAGTTGCTGGCTCCAAGAAATACCCATTTCCTGTACAGCATTTTGGGGGCTTTTGCTTAGCCATTTTCTATCATCCCCTTAAAATGTGTTCTCCTTGCCCCTATCCTTTAAACACGGTCAATGTTCATCTCTCTGGTTCTCACCCCCCCCAATCTTCCATATTCTGTCTCCCATTTTGCTCAGTAGTTTCCCTCTGGGTTCTGAGTAGTCAAAGAATGTCATACCTCAATTCTCACCCCACTTTGCATCTGTCCCCCCCACCCCTTACTCAGCTCATGTTTTTCTCTTCTCTTTTATATTTAAAGATGTGTAACAACTTGCCAGACAGCATTAATGCTCATTTCCTGTGCTGGATTCTTTCTCACATTTTAGTAGCTAGCTCATATCGGCTTCtagtgctctctcctctccactaggTGGTGCATTTCATACAACACTCACCATTGCGTCATCTCACTGAAGACGGGATCAGGAGTACTGTACATTCAATGCGCCCCAACAGTGCTGAGTGCATTCATGGTGCATAGGCGgcagtatgttttttttaaagagcacATGGCTCAAGGTTTTTTTGCTTTGTAGTTTATAAAGAAAATTGATCATATTGTGAGACCAAGGAGTGTTGGTTTTAATGACGTGTTATGATCTATTGACCAGAGGAAGTGTTATTTGCTGTTAGATAAGGATATTGAATGCTTGATATACAATATGTTACATGGAAAGGTAATACGCTTGTTTTTAAAAGAGCTGTAATATTAGAGAACATTTTGGGTTGGAAAACTTTTTTGCTGATAAAATAACAGGGCAGGAGTTTCGGAATTGTCAATGGCTTGTTTTCTGACAAGGCTTTAAGACAATGATTCAGAGCTGTAATGTAGACCATCTGCAATTTTGTGAAAATATGCATTTTGGAAACAAGCTTTTGCTTACATGCTTTAGGCAGTAGGGTAGAGCAATGCCTGAACTTGAAGATAAATTGTTTTGGGGATCATTGCAGGTCTTAGTATTGCTGTCCAGAATGATACTTCACAACTTCCAATTTCACCCGACCCTACTCTGTTCATAGCAGGGTAAACATTCTGCTTGTAATGTTGGTCAGATCATTAATTTGCTAAAATCATTAAGACATCACCAATCTACTGTAACTATCGATATCTATCTTATTTCTTTTGAACTTTTATTTCAAGAACTAGGGCAATATAGATATTGTGATAATGTAaaacgtttttattttattttaaccaaTCAGGGACGTTTTTCCTTAATGCACTGTCTCTGGGGGCAATACAAGGCCACGTTCAGTTGCCAAACGTTGtcgaacgttgcagatagaaatgccatgAATAGAGCTGATGTGTTCGTATTCGTGTCAAAGGTGTTTGTTCTACATAGCCTATTTCTATCCGAACGTATCACAACGTTAAGTCCTGCTGAACGCGCCCCAGGCTAGAAAAGCTAAAATATAAATGAATCAAAAacgttaaataaaaataaaatgatgttttatttttatgtaatttGTTTTCCAACCAATCACAAAAATCCTGTCTGTTACCGGgtagaaaataaaaaatagtgaATTT

Function

NR:

description
serine/threonine-protein phosphatase alpha-2 isoform-like

GO:

id name namespace
GO:0001525 angiogenesis biological_process
GO:0016311 dephosphorylation biological_process
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG:

id description
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941382.1 False 3977 mRNA 0.44 8 49081433 49096225
XM_036941381.1 True 4076 mRNA 0.44 8 49081433 49096321

Neighbor

gene id symbol gene type direction distance location
LOC110487553 NA coding downstream 411 49079125 ~ 49081022 (-)
LOC110486659 LOC106601577 coding downstream 3265 49065331 ~ 49078168 (-)
LOC110485205 LOC106597701 coding downstream 27467 48959315 ~ 49053966 (-)
LOC110486657 LOC106595301 coding downstream 124863 48946728 ~ 48956570 (-)
LOC110486656 syt3 coding downstream 144951 48875671 ~ 48936482 (-)
LOC110486661 LOC106606886 coding upstream 7781 49104102 ~ 49113258 (-)
LOC110486665 LOC106601588 coding upstream 18637 49114958 ~ 49130957 (-)
LOC110485206 LOC106606476 coding upstream 42772 49139093 ~ 49180323 (-)
LOC110486668 armc5 coding upstream 106725 49203046 ~ 49209637 (-)
LOC110486673 elob coding upstream 119437 49215758 ~ 49219547 (-)
G1183473 NA non-coding downstream 36660 49044511 ~ 49044773 (-)
G1183470 NA non-coding downstream 53267 49027962 ~ 49028166 (-)
G1183469 NA non-coding downstream 53531 49027596 ~ 49027902 (-)
G1183468 NA non-coding downstream 56648 49024561 ~ 49024785 (-)
G1183493 NA non-coding upstream 3415 49099736 ~ 49101884 (-)
G1183515 NA non-coding upstream 46934 49143255 ~ 49144184 (-)
G1183512 NA non-coding upstream 72365 49168686 ~ 49169344 (-)
G1183273 NA non-coding upstream 198855 49295176 ~ 49299864 (-)
G1183567 NA non-coding upstream 220961 49317282 ~ 49317483 (-)
G1183337 NA other downstream 413351 48667788 ~ 48668082 (-)
G1183225 NA other downstream 610450 48435826 ~ 48470983 (-)
G1183196 NA other downstream 691715 48379267 ~ 48389718 (-)
setd1a LOC106585476 other upstream 260057 49346540 ~ 49361234 (-)
LOC110486687 LOC106601611 other upstream 390605 49486817 ~ 49504819 (-)
LOC118938314 NA other upstream 440878 49537199 ~ 49544276 (-)
G1183706 NA other upstream 589017 49685338 ~ 49688456 (-)
LOC110486698 LOC106601594 other upstream 739342 49831067 ~ 49853671 (-)

Expression


Co-expression Network