LOC110486668 (armc5)


Basic Information

Item Value
gene id LOC110486668
gene name armc5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49203046 ~ 49209637 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558437.2
GGTGGGTTGGAGACAATTAGTGGCATCATGGCGTCAAAGCCAGTGCCAGGGATCCATAAACATGGGACATGGGCAGGCAACCCCAGAGAAGTGTCCTCAGCCTCCCCAGAGACCTCTCTGACCTGGTGCCTGTCACAGCTCTCTAAACCAGAGAGAGCAGCAGCCGAGGACCACAAGCCAGGCACTGCAGGGCTGGACACCAGTGGACACAAACAGCTGGCCAAAAGGGTCAAAGCTGGGCAGTGGCGAGCACTGGTGGCCATCCGCACACAGCACATTAAAGGAGGAAGCAGTGGGATAGCTCGATTCCGAGGCCAGGGTGGACTGCGCACTCTCCTGGACCTGCTAAAGCACCCTGAGTGTTCCAGGAAGACTCTGGACCTGGCTCTCAGCATCCTGGCTAACTGCTGCACTGAGAGACAGACACGAGTTGAGGTTAGGAAGCTTGATGGAATATCTATTGTGGTGGGCATTTTGAAGAAGAATGTAGCCATGGAGACAATCCAGAACAGAGCAGCCCGGGCCTTGGGGAACTTGGCCATGGACCCAGAGAGTTCCACACTTATCCACTCTGCcgGTGGTGTTCCACTCCTGCTCCTCTGCGTCTCTCTTGCCTCtgccccatcccctccctctgaTGACCCACTGGAAGCCCCTTCCTCTAAACTAGAGTGTGCTCAGTCGGCTGCCCGTGCCCTCCTCTACCTTGCAGACACCCCCTCAAACCGCCTTTTACTGCTCACCCAGGGTAGTCTGACTGCTCTCGCCCCGCTCATTGCTCCAGAGTACCCTCTGGGGCTGAGGAGAGCAGCACTCCGGACCCTCCATGAGCTCACCAGGAGCTGTGGTGTAGAGTGTGCTAGAGAGGTGTCCCGATCTGGGGTTCTAGCTCAGCTAGGTGTCATGGCTTCGGGAGAGGCCGCTAAACCTTTTGAGGAGCTTGCGTTGAAAACCCTGGCCAACATGTGCACTCAAGGCTGCTTACGTCCTCTGGTGGGTTCCCTGGGGGTAATCCAGAAGTTTACGGAGGAGGTCAAGAAGGACGGCCTGAAGTCTGgagtgttcctcaaggctctctGCTTATGCTGCAAAGAGGCAGTGAACCGGGCCAAAGTGAAGGAGAGTGGCGGTCTGGAGGTGTTGATTGGCTTCCTTGGTGTCCATCAGAGCCACCCCCTCGACCGATTGGTCATTCTGGCTTGTGTTGACTTTGTCTATGACGAAGCTGCCCTGGAACAGTTACAAGAATTGGGAATAGTCCCCCTGCTAGTTGCTCGGTTAGTGGAGCTGGCTAAAGGTGAGGAGCCATCTGCTGGGAAGATGGATGTGAGCCTCACCTCTACCATGTTTTCTTCAGAGCTGCTGTCTACGTCATGTTTCGACTCATTTGACTTCCCTCCCCCAGAGGGGAACAGGAAAGAGGAGATGGGGAAGGAGCATGTCCTTGGGTCATCCAGCTTTCTTAGCCTGAGGTCCTGGTTGGTGTCTGAAGGTTTGATCTCCTCTGAGGGGGATCTTCTTGACTCTCCTGGAGGCACGGAGGGAGATTGGGGGAGTCTTCATATCCCTTCTTCTTCTCCCCAAACCTCTTCCACTGACTGTCATTCCCCTTTAAAATGCTTATCTCCTACCCGCTCACTACCTTCCTCCACTCCCTTATCCGCACCCAAATCTCTGAGTCAATCCACCCCCTCTACCTCAATGAGTTCTCCAGCTCAGGTCCACATGTCATCTCCCTCAAAAACCGCTGATCTGTCTACCTGTGTCCCtctgccttcctctacctccaccccccaAGCCCAGCCCggctcctctacctccaccaccCAAGCCCAGCCTGGCTCCTCTACCTCTGCTCTCCCTTCCTCAACTATCCCACCCCTCACTTCCGTCTCCCCATCCAAGTTCTCCTCCCCTCCACGGAAAAGGCCACGTGTCCCCTCAACCACCCGCTCCAGTGTGGTGCCCCTCGACACCCCTCCCACAGTGTCCCGACCCCAGGCCTATCACCACCCCTACCACCCTGAGCCTTGGGCCCCAGAGTCTCCCATCCTGCTGCTGCTCTCACGCTTCTCTCACGCCACGGACCCCAGCGCTGCTCTGGTCAACTCGGGCATCATCTCTGGCCTACTGTTCTACCTCAGCCAGCATCAGGACCCCAGCGGCAGGTGCTTCCGCATGCTGTGCCGGCTGAGCTGCAACCCCAACTGTCTGCAGGCGCTGGTCAGGACTGGCTCAGTGGCTCTGATCCGCCATCACCTGGTCCAGAGAGGGAGTGACCCTGAGAGTTGGGGAgctggagagaggcagagtgataGGGTCAAGGCCAAAGTGAAACAGCTTGGTCTTGCTCTGCTTAGTAATCTACGTGTTCAGTGTGAGTCTGGATTTGGTTCTGGAGTACTGAGCCATGTGATTCTGTCAGGCTCAGAGTCAGACAAGCTGAACTGTGCTCTGTCTCTACCACTAGTAAATGGTAACAAGGTTCTCTTGAAGAAACTTCTTCTAGACAACGGTGGTCTACTCTTGGCTCTGGAGCCCCTTGGATGTAATGAGGACGAGGAAGAGGAAGACCATCACACCAGTGAATGCCGACGACTCCTCTCAGATTGTCTCAACTCACCGCAACATGTCTCCGCCCCCCAGCTCCACTCTCTATATTTCTCCCTGCTGATTGGATGCCTCTCTAGTCTGATGGGTTGCCCCAAAACAGTACTGGCTAAAAGAAGGTGCAGGGTACTCAGTCCTATCAAACCCCTGTCAGTCTCACAAACCGGTGAAGCTTCACCCCCTCCCTTAAAAAAGCCTCGTCTGGTCAATATCTGTGCTTACAATGACTCAACCTTTGACCTCCTCTTCCTGCTGGATGATGGGAGCCAGGTGTCAGCCAATAGGGAAGCAGTGGCTGGGGCCGAGGGAACCGAGGTGGTGGGGTCGGAGTACTTCAGGGCCCTGTTGAGGGGGAGCTTTGGAGAGGCTCAAGGGAGAACTGGGGAGGCCATCCCCATCAGGGATGTGAGCCAAGGCATGCTGCTACCTGTACTGCACTATCTGCATGGCTGTCGCCTGAACAAGGATGGAGAGACTGCAGAGGAACAGggggatgagacggagagagaaggcagaggagAGTGTCAGATTTTGGGATCCTTGGCCTCTGAGGGGCTGGGTGTCTGGAGAGACGGGGCAGAAGAACCCTCACCAGAGGCACAGAGCTTCCAGAAGACCCCCCTAGCTGAGACGATGATGGGGGCCTGTAGGTTTTTGGTGACagagttgcagagggaggtggaggatctgtgtgtgtctttgctgtCCTGCTCTGCCAAGAATGCTGGTCGAATTGCAGACGTTGGCAAAAAGCCTCCATCTAACATGGACCAATATGGATCAGAGGGAGAGTCTGCTGACGAGAGCCTGGCAAACCGCACATCTGGACTAGAGTTGAGTGGTTCTGAGGCCCAGACAGACTCCTTGGCCCCCACAGTGACAGCAGGCCAGGCTGAGTCACTACATGGCTCTGGACTCCAACCCTGTCAGCAGACAGAGGGTAGACGGCACTCTGCCCCTGGACCAGGCCAGAAGGGCATTAGTGCACCAAAGACAACCTCAGGACTGGAGACTTGTGTCAATCCGCTGAAATCAAGTTCTGCCTCAAAGTGCTGCAAAAGACGTTCTAAACTGCGGAGTGTTTCAAACACACAGAAGGTTGTGGATTCTGTACAGGACTCTAAAGGTGGTCCTGGTAGATGGACCCTCCTACCACAGGTGTATTGGTTTTCCCAACGGTACAGCTATCCTGGACTGGGTAGGGCCTGCCTGTCCCTACTGCTGGGCTCTCAGGGCTTCTCCCAGCCCCGCCCTTCTTCCCTGGCTGCAGACTGCCTGCGCAGACTGGCCAGAGAGGCAGACTGTACAGAGACTCTGAAACGTGACCTAGTGAGTCTGGCCACCATGGCCCTGAGCTGAGAGGGGGAGGGCTAGGAGGAAAGAGGGGTGttggatggagatggaggtgaggagaggagaacatgTGATTGTCTCTCCAATGACACTGAAGTTAACGTTTGTCATTGTGAGAAGTCTTCACAACATGATTAGCCTTCCTTCCTTGTGAATATCTGTCTTTGTCTCACAACACATAACCTTTTATATTCCAAAATTGGTGTTTACAAAGTAATTGAAGTTTGAATGATTTTCTTCAGAATATTAAATTTATATTTAAAGGAGTCATGCTGCCATTTAAAGGGATGGGTTCTCAGACAGTGAATCATGAGGAAAATAATTATCTCATGGTGCACTGTAAATTAAGTTGTATTATAATGAAAACATTAGCATAATGTAATATGCTAAATACTTTTGTTGCATGTAAATGTTaacttttttttatattttcagtttGATTTTGAAATATACACAGCTGTCCTGTAAATGTCCTGTATTGACTTGGATGACTCTAATAATCAGGTGGGACTGGGTGCCATGATGTATATGCTGTAAATAAAGTGAACTTTAGGAGTAGCTGCAAGGTGACGATAACAGAGATCAGCTTTCACTTGCCTCATGTGAATCCACGCTCCTCAATAAATCTGTTTGGATGTC

Function

symbol description
armc5 Human ortholog(s) of this gene implicated in ACTH-independent macronodular adrenal hyperplasia 2. Orthologous to human ARMC5 (armadillo repeat containing 5).

NR:

description
armadillo repeat-containing protein 5-like

GO: NA

KEGG:

id description
K22499 ARMC5; armadillo repeat-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558437.2 True 4602 mRNA 0.53 7 49203046 49209637

Neighbor

gene id symbol gene type direction distance location
LOC110485206 LOC106606476 coding downstream 22723 49139093 ~ 49180323 (-)
LOC110486665 LOC106601588 coding downstream 72089 49114958 ~ 49130957 (-)
LOC110486661 LOC106606886 coding downstream 89788 49104102 ~ 49113258 (-)
LOC110486660 LOC103034594 coding downstream 106725 49081433 ~ 49096321 (-)
LOC110487553 NA coding downstream 122024 49079125 ~ 49081022 (-)
LOC110486673 elob coding upstream 6121 49215758 ~ 49219547 (-)
LOC110486672 LOC106606893 coding upstream 11411 49221048 ~ 49225262 (-)
rusf1 cssa06h16orf58 coding upstream 41990 49251627 ~ 49263335 (-)
prr14 LOC106601590 coding upstream 57971 49267608 ~ 49277799 (-)
cd2bp2 cd2b2 coding upstream 68512 49278149 ~ 49281110 (-)
G1183512 NA non-coding downstream 33702 49168686 ~ 49169344 (-)
G1183515 NA non-coding downstream 58862 49143255 ~ 49144184 (-)
G1183493 NA non-coding downstream 101162 49099736 ~ 49101884 (-)
G1183473 NA non-coding downstream 158273 49044511 ~ 49044773 (-)
G1183273 NA non-coding upstream 85539 49295176 ~ 49299864 (-)
G1183567 NA non-coding upstream 107645 49317282 ~ 49317483 (-)
G1183297 NA non-coding upstream 115390 49325027 ~ 49325527 (-)
G1183588 NA non-coding upstream 223300 49432937 ~ 49433171 (-)
G1183590 NA non-coding upstream 226131 49435768 ~ 49435981 (-)
LOC110485205 LOC106597701 other downstream 225638 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 266589 48875671 ~ 48936482 (-)
G1183337 NA other downstream 534964 48667788 ~ 48668082 (-)
G1183225 NA other downstream 732063 48435826 ~ 48470983 (-)
G1183196 NA other downstream 813328 48379267 ~ 48389718 (-)
setd1a LOC106585476 other upstream 146741 49346540 ~ 49361234 (-)
LOC110486687 LOC106601611 other upstream 277289 49486817 ~ 49504819 (-)
LOC118938314 NA other upstream 327562 49537199 ~ 49544276 (-)
G1183706 NA other upstream 475701 49685338 ~ 49688456 (-)
LOC110486698 LOC106601594 other upstream 626026 49831067 ~ 49853671 (-)

Expression


Co-expression Network