hsd3b7 (hsd3b7)


Basic Information

Item Value
gene id hsd3b7
gene name hsd3b7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49326722 ~ 49339857 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558451.2
TTTACTaacgcccagagcgcactctggcactacAGGGTGATTTTACAAACACAGAGATAAGATTGTCTTACAATGAAAGTTAAGACACGTTCAGACTAGTTTGAAAATATACTTGTTATGACAACGTAATAATTGCATGCGGCAGCTTTCGAAAATAAACACATGAATTGGACTAGCGCCGTCCCATTGTTGCAAAGAGTTATGGGATATTAGATTTCCGTTTTCTTAGTCATTTGCAATCTAGCTTTCAGGGGGGAAGTTCCAGACCGTAGTAGAATAATATCCATATAGGGTCGTCAAGCGATTTTGTAATACATAGTAGTCTTTTGATATTGTCTTCTCCAACCCTGTGTGGTACTATACTGTATGTCATCAGGGTGAGTGTGCATAGTGGAACGCACACAATGTCGCACAGGAACTTGCAGGCTTGCCGGAAACTGCAATGCCCTCGTGCATAGAGAGGATACAACAGAAGAAGGTTGGATCGCAGAGGGAGTTGTAGAAGATCAACAAGGACGACTCAGTAACTAATCAACCAAACATCAATTGTTGATAGTAGCAACTAGCAAAAGTGAAGAATGTCGACGAAAGAACGGGGCTTGGTTTATCTCGTCACTGGGGGCTGTGGGTTCCTCGGACAACACCTGTTACAGGTCCTTTTGGAGAAAGAGGATGCGGTAACGGAAATTCGACTTTTTGACAAACACATCGACTCAAGTTTAAATGGCCACAGCACagaGCGGGTAAAGGTGGTGGTGACGCAGGGGGACATCACAGATTACTCCAGTGTCCGGGAGGTTTCCAAGGGGGCAGACCTGGTCATCCACACGGCCAGCCTGGTGGATGTCTGGCACAGAGTCCCTGAGACAGTCATCCAGGCTGTGAATGTTCAAGGAACTGTGAATGTGATCAATGCCTGTGTGGAGAATGGTATTCAGTATCTGGTCTACACCAGCAGCATGGAGGTGGTCGGCCCCAATGTGAAAGGAGACCCTTTTATCAGAGGTGATGAAGACACCATCTACAATGTTTATCACGATATGCCCTACCCCAGGAGCAAGGCCAAGGCAGAGAAACTGGTGCTGGAGGCCAACGGCAATAAGGTGAAGGAAGGGGCCTGCTTGTACACATGCTCCCTCCGTCCCACAGGGATCTATGGTGAGCAGCACCAGCTGATGAGGGACTTCTATCAGATGGGTGTGAGGACAGGGGGCTGGATCATTCGAGGCGTCCCAAAGGACACGGAACATGGTCGTGTCTATGCAGGTAACGTGGCTTGGATGCATCTGCTGGCTGCTCGCTCCCTGAGAGAGCACCCCCAAAGGCTTGGAGGGGAAGTTTACTTCTGCTATGACGACTCACCCTACAAGAGTTATGAGGATTTCAACATGCAGTTCCTGTCTGGGTTCAACTTCCGCCAGGTCCATGTGCCGCTATTGGTGCTGTGGTTGGTGGCGTGCCTGAATGACCTGCTCCGCTGGGTGCTGAAGCCTGTGTGCAGCTACACACCATTACTCAACCGCTACACACTCGCTGTGGCCAGCACCTCCTTCACAGTGGGTTCAGACAAGGCCCAGCGCCACTTTCAGTACCGCCCCCTCTATGACTGGGACCAGTGCAAGGCCCGCACACAGAGATGGGTGGACACCTTTCCCTTCGCAGGCCCCAAGGACTCCTGATCTGGGCTGATCTGCTGGTCTGGTGGAACCTTGTCTGGGCTAAACCGATGCACCACACATCATAAcctgggatggatggaggagtgAGAGGACTTTCTCAGATTTATATTCTCACTATGTTTGCTCCATCATAAGCAGTATTATCATTACACATATGCAAACAAACTCTTGACCCCTGAACTCTTAAACCCTGAACTATGACCTCCTGCACGTGTTCTTCAAAAATGGTTATGTCCTCCTACCTGTCATTACTTGTGGCTAGCCTGTAGCTCCTCAGGCAAAATGATGACAAGGCATGTTCCACACTGAAATGGGTCACTTATCCATCCCATGATCTTCTGATTCACATGAGACCCTTCCCAGCCTTAAATAAGAGATAATATATTGGAGATTCAATATAAATGTTTGGGGCTTTATCGGACATTGCAATATTCATCTTCTTACAAAAgcggtagatataatgtgataGTAGTCATAAAAGGGCATAGATATGTGATATAGGAAAGCTGCTCCTGAATTGTTTTGAGTCTATTTCCAACAATACATTGCTATACATATTTTGCAATACATACATGAAAATGCAATACATTTTTCACAAGACATCATCACTACATAGACTTGATCTGTTTTTGTTGAAGAGCACTAGtgcagaaaataagtatttacatCTTCTTTTTACATCTACAACATGCATTAATGCACACAGAATATTCTCTGAATATGTTCTATGTGATTTTAGAGTTTTATGAATCACCTGCTATACATTAAGGTCATTTTATAATCTGAATGCACTGACAATTtaaaaacaataataaaaaaaatctttaaaaatAATATTTGCCAGTGCATTCAGATTTTAAACTTCAGACAGAGAAAAGGTTAATATTATATTTCATGCCTATTGATGAAATTATCATTTTGAGAAGTAGCGTTACTTAAAGAGCAACTGAAGGCAATAaaaaaacatattctattct

Function

symbol description
hsd3b7 Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to act upstream of or within steroid biosynthetic process. Is expressed in several structures, including adenohypophysis; digestive system; lens; macrophage; and solid lens vesicle. Human ortholog(s) of this gene implicated in congenital bile acid synthesis defect 1 and intrahepatic cholestasis. Orthologous to human HSD3B7 (hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7).

NR:

description
3 beta-hydroxysteroid dehydrogenase type 7-like

GO: NA

KEGG:

id description
K12408 HSD3B7; cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558451.2 True 2656 mRNA 0.45 7 49326722 49339857

Neighbor

gene id symbol gene type direction distance location
LOC110486679 LOC106601593 coding downstream 13733 49300153 ~ 49312989 (-)
cd2bp2 cd2b2 coding downstream 45612 49278149 ~ 49281110 (-)
prr14 LOC106601590 coding downstream 48923 49267608 ~ 49277799 (-)
rusf1 cssa06h16orf58 coding downstream 63387 49251627 ~ 49263335 (-)
LOC110486672 LOC106606893 coding downstream 101460 49221048 ~ 49225262 (-)
setd1a LOC106585476 coding upstream 6683 49346540 ~ 49361234 (-)
LOC110486683 ccdc47 coding upstream 25561 49365418 ~ 49369859 (-)
kcnh2 kcnh2 coding upstream 48301 49388158 ~ 49429351 (-)
LOC100136168 LOC106585555 coding upstream 108385 49448242 ~ 49456279 (-)
LOC110486686 map3k3 coding upstream 127909 49467766 ~ 49485525 (-)
G1183297 NA non-coding downstream 1195 49325027 ~ 49325527 (-)
G1183567 NA non-coding downstream 9239 49317282 ~ 49317483 (-)
G1183273 NA non-coding downstream 26858 49295176 ~ 49299864 (-)
G1183512 NA non-coding downstream 157378 49168686 ~ 49169344 (-)
G1183515 NA non-coding downstream 182538 49143255 ~ 49144184 (-)
G1183588 NA non-coding upstream 93080 49432937 ~ 49433171 (-)
G1183590 NA non-coding upstream 95911 49435768 ~ 49435981 (-)
G1183592 NA non-coding upstream 99294 49439151 ~ 49439353 (-)
G1183595 NA non-coding upstream 104507 49444364 ~ 49444722 (-)
G1183604 NA non-coding upstream 121635 49461492 ~ 49461846 (-)
LOC110485205 LOC106597701 other downstream 349314 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 390265 48875671 ~ 48936482 (-)
G1183337 NA other downstream 658640 48667788 ~ 48668082 (-)
G1183225 NA other downstream 855739 48435826 ~ 48470983 (-)
G1183196 NA other downstream 937004 48379267 ~ 48389718 (-)
LOC110486687 LOC106601611 other upstream 147069 49486817 ~ 49504819 (-)
LOC118938314 NA other upstream 197342 49537199 ~ 49544276 (-)
G1183706 NA other upstream 345481 49685338 ~ 49688456 (-)
LOC110486698 LOC106601594 other upstream 495806 49831067 ~ 49853671 (-)

Expression


Co-expression Network