kcnh2 (kcnh2)


Basic Information

Item Value
gene id kcnh2
gene name kcnh2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49388158 ~ 49429351 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124676.1
ACTTCGTCtataatttgatttatttaaaacTCTGGAGGTTCATGCGTCGGAGAAGTCTCATCTTTCTGCGTCAAAATGCCTGTGAGACGCGGTCATGTAGCCCTCCAGAACACTTATCTGGACACCATTATCCGGAAATTCGATGGACAAAATCGTAAGTTTCTGATAGCCAACGCTCAGATGAAGAACTGTGGCATTATCTACTGTAACGAGGGCTTCTGCCAGATGTTTGGCTTCTCGCGGGCAGAGATCATGCAGCAGTCCTGCACCTGCCAGTTCTTGGTGGGGCCTGGCACCATGAAGACTGCCCTGGCACAGCTGGCACAGGCCCTGCTAGGGTCAGAGGAGCGCAAGGTGGAGATCCTCTACTACAACAAAGAAGGGACCTGCAGGCCCTGTCTGATTGATGTTGTTCCTGTGAAGAAAGCAGAGGGACAGGTCATCATGTTCATCCTCAACTTCCAGGAAATCATTGACCCCTCCCTCAAGAAACCAGGTCTGAGACAGAGGGTGGCCCAGGGCTGGGTATGGGCAGGGCAGAGTCGCAGGCTGAAGTTGAGACTGCCATTGGTACGTGCAATGCGTCGGTCTTCCCTCGCCAAAGACCAGTTtgggggggtggtggtggactaCCCACAGCCCAACAGTGAAGAGATCCCTCTGAAAGAGTTCCGTATCCCGTCCAAGGAGAGCTACATGCAGTCTGAGACAGAGGCGCTGATAGAGCAGGACCACGAGTTCTCCCAGCCTGCAAGCCACTACTCCCCCAAACTGCTGTCCCTATTGTCAGAGCGGCTGGAACCCAGCGTGCCCTTCCTCCCCAGCAGCCCCTTCTCCAGTGCAGCCTTCCCCAGGACGGTCCTGCCCCGGAGCCGCTCCAGAGAGACTGTCGGCAGCCTCCGCAGAGCTTCCTCCCTGGATGACCTCGGCAGCATGAGGGCCGAGTCGGGCCGACCAGGAGACCCACGCTCCAACAGCACTCCATCTGAATCAAAACAAACCAAGCCAAAGCTACCTGGGCCTGTTGGAGACCTGAAGGCCGGTACTCTGAGCTCCACCTCAGACTCGGACCTGATGCGACGCAGGACCAGCACTCGTAACCCCCTCACACTCAGTTTCGCCTCCGACCTCTTGCGACCGCCCTCACCCACTGAGATCGAGATCATCGCTCCCAGCAAAGTAAAGGACCGCCACCGAGACGTCACAGAGAAGGTCACACATGTCACACAGGTACTGTCCCTAGGGGCTGATGTCCTGCCAGAGTACAAGCTCCAGGCGCCTCGCATCCACAAGTGGACCATCCTCCACTACAGTCCCTTCAAGGCGGTGTGGGACTGGGTCATCCTCCTGTTGGTCATCTACACGGCCGTCTTTACCCCCTACTCCGCTGCCTTCCTGCTCAACGAGATGGAGGACGAGCTCCGGCGCTCCTGTGGCTACACCTGCAACCCCCTCAACGTGGTGGATCTGGTGGTGGACGTCATGTTTATCGTGGACATTCTCATCAACTTCCGGACCACATATGTCAATCACAATGACGAGGTGGTCAGCCACCCGGGGCGCATCGCCCAGCATTACTTCAAAGGCTGGTTCCTCATTGATATAGTGGCAGCCATCCCCTTTGACCTGCTCATATTCCGCTCTGGCTCTGATGAGccccaGACAACCACTCTGATTGGCTTGCTGAAGACTGCTCGGCTGCTGCGATTGGTGCGTGTGGCGCGGAAGCTGGACCGCTACTCAGAATACGGCGCCGCCGTTCTCTTCCTCCTCATGTGCACCTTTGCCCTCATTGCCCATTGGCTGGCCTGTATCTGGTACGCCATCGGCAATGCGGAGCGCACCAACTCGGCCCGCATCGGAGGCATGAAGATCGGCTGGCTGGACAACCTGGCTGAACAGATTGGTAAaccatacaacgacacagacccTGCCTCCGGCCCCTCCACCAAGGATAAATACGTCACAGCGCTTTACTTTACCTTCAGCAGCTTGACCAGCGTGGGCTTCGGCAACGTTTCCCCCAACACCAACCCTGAGAAGATCTTCTCCATCTGCATCATGCTAATCGGCTCTCTGATGTACGCCAGTATCTTTGGTAACGTGTCGGCTATCATCCAGAGGCTGTACTCCGGCACGGCCCGTTACCACACCCAGATGCTGCGTGTCAAAGAGTTCATCCGCTTCCACCAGATCCCAGAGGGACTACGCCAGAGACTGGAGGAATACTTCCAACATGCCTGGTCCTATACCAATGGCATCGACATGAACGCTGTGCTGAAGGGTTTCCCTGAGTGTCTGCAGGCTGATATCTGCCTCCACCTGAACCGCTGTCTGCTCCAGAACTGCAGGGCCTTCAAGGGGGCCAGTAACGGCTGTCTGCGGGCGCTGGCCATGAGGTTTAAGACCACCCACGCCCCTCCGGGCGACACCCTGGTCCACATGGGAGACGTCCTCTCAGCTCTCTACTTCATCTCTAGAGGGTCCATAGAGATTCTGAGAGACGATGTGGTGGTGGCCATACTGGGTCAGAATGATATCTTCGGGGAACCCATCTATCTTTTTGGGCGTCCAGGGAAGTCGAGTGCAGACGTCAGGGCTTTGACCTACTGTGACCTCCATAGGATCCTGAGGGAGGACCTGCTGGAGGTGCTGGACATGTACCCAGACTTCTCTGACTGCTTCTGGACCAACCTGGAGATCACCTTTAACCTCCGAGATGTAGATAGAATGAACCAGGCACCTCCCAGTGAGGATTCTGAATGTGGATACCGACGGCCGCGTCCACGACGCACGAGAAACCGgcctgACGGCATGGACCGTGAGGACTCATTTCCAGACCAGTCGTGTCCTTTGGGGAACCACAGCGGCCCGGACACAAGCTCCCACTGGGAGGGCATGTGTAGCAGCGCCAGCGCCTGCTCTCAGTCCAGTGACGATGAGATGAAGCCCCTGGGACATAGCAAAGCAGAGCTGTACCCCTCTGTGGACGACACCGATGACTACCCCCCTGCTGTGATCAGCCTGCTGCCTCCCAGTGGACCCTCAGCCGGCATGGGGCCGCCCCTGGACCGAGGAAGTCACCAATACACAGCTGCAGCCCCCATCAACATGCCAGGCCCAGGGGTGTATGGGTATTGGCCTGACCGGAGGACCAGTCAGTTGTCAGATCCCCAGCGGCGCTGCTCCTCAGTCAGGGGcacataccactctcctccctgTGCACAGAACAGGCCCAATGACCTGGAGTCCAGAGTGGAGCTGCTACAGTCCCAGCTCCACAGACTGGAGACTCGGATGACTGCAGACATCCACGTGATCCTGCAGCTGCTCCAAAGGCAGATAACCCCAGTGCCCCCGGCCTACAGCACTGTGTtgcccagccctcaccctgctcACCCCACCACCCTGTACAGCACAGCAGCCCCCATCATCCACACTGTCCCCTCCATGCCCCCAATCAAGATTGACAGCATGCCTTCGCCACTGCAGAGCCCGGACTCAGAGAAGCACAAGTCCAAGGACTCCCTG

Function

symbol description
kcnh2 Enables several functions, including C3HC4-type RING finger domain binding activity; protein homodimerization activity; and voltage-gated potassium channel activity. Involved in several processes, including ion transmembrane transport; potassium ion homeostasis; and regulation of ion transmembrane transport. Acts upstream of or within regulation of heart rate by cardiac conduction. Located in cell surface; perinuclear region of cytoplasm; and plasma membrane. Part of inward rectifier potassium channel complex. Implicated in long QT syndrome; long QT syndrome 2; and short QT syndrome.

NR:

description
potassium voltage-gated channel subfamily H member 6-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0018106 peptidyl-histidine phosphorylation biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0023014 signal transduction by protein phosphorylation biological_process
GO:0000160 phosphorelay signal transduction system biological_process
GO:0016021 integral component of membrane cellular_component
GO:0000155 phosphorelay sensor kinase activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04905 KCNH2, KV11.1; potassium voltage-gated channel Eag-related subfamily H member 2

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124676.1 True 3531 mRNA 0.57 18 49388158 49429351

Neighbor

gene id symbol gene type direction distance location
LOC110486683 ccdc47 coding downstream 18299 49365418 ~ 49369859 (-)
setd1a LOC106585476 coding downstream 26924 49346540 ~ 49361234 (-)
hsd3b7 hsd3b7 coding downstream 48301 49326722 ~ 49339857 (-)
LOC110486679 LOC106601593 coding downstream 75169 49300153 ~ 49312989 (-)
cd2bp2 cd2b2 coding downstream 107048 49278149 ~ 49281110 (-)
LOC100136168 LOC106585555 coding upstream 18891 49448242 ~ 49456279 (-)
LOC110486686 map3k3 coding upstream 38415 49467766 ~ 49485525 (-)
LOC110486687 LOC106601611 coding upstream 57466 49486817 ~ 49504819 (-)
LOC110486688 LOC106601605 coding upstream 85699 49515050 ~ 49522522 (-)
LOC110486692 LOC106606873 coding upstream 101420 49530771 ~ 49533590 (-)
G1183297 NA non-coding downstream 62631 49325027 ~ 49325527 (-)
G1183567 NA non-coding downstream 70675 49317282 ~ 49317483 (-)
G1183273 NA non-coding downstream 88294 49295176 ~ 49299864 (-)
G1183512 NA non-coding downstream 218814 49168686 ~ 49169344 (-)
G1183515 NA non-coding downstream 243974 49143255 ~ 49144184 (-)
G1183588 NA non-coding upstream 3586 49432937 ~ 49433171 (-)
G1183590 NA non-coding upstream 6417 49435768 ~ 49435981 (-)
G1183592 NA non-coding upstream 9800 49439151 ~ 49439353 (-)
G1183595 NA non-coding upstream 15013 49444364 ~ 49444722 (-)
G1183604 NA non-coding upstream 32141 49461492 ~ 49461846 (-)
LOC110485205 LOC106597701 other downstream 410750 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 451701 48875671 ~ 48936482 (-)
G1183337 NA other downstream 720076 48667788 ~ 48668082 (-)
G1183225 NA other downstream 917175 48435826 ~ 48470983 (-)
LOC118938314 NA other upstream 107848 49537199 ~ 49544276 (-)
G1183706 NA other upstream 255987 49685338 ~ 49688456 (-)
LOC110486698 LOC106601594 other upstream 406312 49831067 ~ 49853671 (-)
G1184986 NA other upstream 1197296 50626647 ~ 50628539 (-)

Expression


Co-expression Network