Item | Value |
---|---|
gene id | LOC110486690 |
gene name | LOC106606872 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 49522530 ~ 49530733 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
STE20-related kinase adapter protein alpha-like isoform X1 |
id | description |
---|---|
K08271 | STRADA, LYK5; STE20-related kinase adapter protein alpha |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021558462.2 | False | 2268 | mRNA | 0.50 | 13 | 49522530 | 49530730 |
XM_021558463.2 | False | 2048 | mRNA | 0.51 | 14 | 49522530 | 49530730 |
XM_021558466.2 | False | 2181 | mRNA | 0.50 | 11 | 49522530 | 49530730 |
XM_021558464.2 | False | 2220 | mRNA | 0.51 | 13 | 49522543 | 49530733 |
XM_021558467.2 | False | 2130 | mRNA | 0.51 | 11 | 49522546 | 49530733 |
XM_021558468.2 | False | 2187 | mRNA | 0.51 | 12 | 49522582 | 49530730 |
XM_036941401.1 | False | 2123 | mRNA | 0.51 | 12 | 49522611 | 49530733 |
XM_036941402.1 | True | 2008 | mRNA | 0.51 | 10 | 49522627 | 49530733 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486684 | LOC106601519 | coding | upstream | 138008 | 49370238 ~ 49384522 (+) |
LOC100136718 | mlc-2 | coding | upstream | 223279 | 49295336 ~ 49299251 (+) |
LOC110486677 | LOC106601591 | coding | upstream | 238414 | 49281106 ~ 49284116 (+) |
LOC110486678 | NA | coding | upstream | 255763 | 49263529 ~ 49266771 (+) |
LOC110486670 | LOC106606891 | coding | upstream | 309111 | 49210465 ~ 49213419 (+) |
LOC110486693 | rundc3a | coding | downstream | 2287 | 49533020 ~ 49551503 (+) |
LOC110486691 | LOC106601608 | coding | downstream | 20989 | 49551722 ~ 49557177 (+) |
LOC110486695 | LOC106601598 | coding | downstream | 28055 | 49558788 ~ 49567825 (+) |
LOC110486696 | LOC106601597 | coding | downstream | 40775 | 49571508 ~ 49577269 (+) |
ndua4 | ndua4 | coding | downstream | 49591 | 49580324 ~ 49584562 (+) |
G1182795 | NA | non-coding | upstream | 13620 | 49508693 ~ 49508910 (+) |
G1182784 | NA | non-coding | upstream | 53721 | 49467765 ~ 49468809 (+) |
G1182773 | NA | non-coding | upstream | 55449 | 49466691 ~ 49467081 (+) |
G1182772 | NA | non-coding | upstream | 56321 | 49465715 ~ 49466209 (+) |
G1182771 | NA | non-coding | upstream | 56874 | 49464439 ~ 49465656 (+) |
G1182809 | NA | non-coding | downstream | 37630 | 49568363 ~ 49568629 (+) |
G1183727 | NA | non-coding | downstream | 184393 | 49715126 ~ 49715459 (+) |
G1183729 | NA | non-coding | downstream | 201613 | 49732346 ~ 49732859 (+) |
G1183730 | NA | non-coding | downstream | 202646 | 49733379 ~ 49733590 (+) |
G1183737 | NA | non-coding | downstream | 205531 | 49736264 ~ 49736493 (+) |
G1182742 | NA | other | upstream | 96307 | 49419570 ~ 49426223 (+) |
LOC110486671 | LOC100335037 | other | upstream | 319840 | 49198846 ~ 49202693 (+) |
G1182629 | NA | other | upstream | 403833 | 49114975 ~ 49118697 (+) |
G1183819 | NA | other | downstream | 301488 | 49832221 ~ 49835014 (+) |
G1183875 | NA | other | downstream | 352088 | 49882821 ~ 49883435 (+) |
G1184435 | LOC106606845 | other | downstream | 1455080 | 50985813 ~ 50986566 (+) |
LOC110487554 | LOC106601638 | other | downstream | 1853439 | 51384172 ~ 51394113 (+) |