LOC110486696 (LOC106601597)


Basic Information

Item Value
gene id LOC110486696
gene name LOC106601597
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49571508 ~ 49577269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558475.2
GAGCTACCTTGTATGCTGCATATAAGTTGATtcaaatgagaaaacaaatcacATGGTTCATGCATAGTTGTAAATTGTAGCATCTGCGTTCTGCCAACACTGTTTTATATGAATGGTATAGTAGCTACAAACTCAGGCATATCCGTTGAGGGCTCCTATAATGAACCACTGAGGTCTTTGAGCCAGCTTGTTCTCTGACGTATCTCAATGAAAACAACTACACTCCGGTATCCTTTCCACCGGGAGAATTGTCCGAATGGGATGCCTTTGACATAACCTGGATCGGGACAGGAGTAACGTTTGCTAGTACGGGAGACCTGCAATTAAGGACATATATTCCGGAGTCAACACTATACTGCGACAGCTGGATTGACAACAATGATGGATTTAGCTAATTGCTAACAACCAACCCACCAATCTAACGttggctaactaacgttagctagctagcaaagtcaGCTAGCTAACAGGGACATTTAGCTAAATATTTGAAGAGGAACCACGGACTGATCTGTAGTCACATTAGCAACTGTCTGCCCAGTTAGGGTAACGTTATAGCGTCACCATTTCCGGGCTTGTGATATCTGAGATTGTGGAGCGGGACGTTGCTTTGAGGGGTACGGGGATCGGATCTGTATCGGTTTCCATACCCGGACAGCTAGAGGACAGCATGGCTGCAGGAAAGGGAGCAGGGAAGCCCTCGCTACTGCAGAACGAGCGTATACGATTCATTGTCTGTTTCCTCGGAGTCTTCGTTTGTTATTTTTACTATGGCATATTACAAGAAACAATTACCCGAGGACAGTATGGTGAgggggagaagaaggagaagttTGTTTATGCCACAACGCTGGTATTCATCCAATGCATCATCAATGCTGGGTTTGCCAGGATCTTGATTCAGTTTTTTGAGGgttccagaccagaccacaccaaaAGCTGGCTCTATGGAGTGTGTTCCCTGTCTTATCTTGGAGCCATGGTATCCAGCAACTCTGCCCTACAGTATGTCAACTACCCCACACAGGTGTTGGGGAAGTCTTGTAAGCCCATCCCAGTGATGATTCTGGGTGTATTTGTACTGAGGAAGAAATACCCACTGGCCAAGTACCTGTGTGTGCTGTTGATCGTCAGCGGGGTGGCCCTGTTCCTCTATAAACCCAACAAGAGTGTCACTTCCACAGAATCTGCTTTCGGCTTCGGGGAGATCCTGTTGCTGCTATCGCTGACCATGGACGGTTTGACTGGTGTGGCCCAGGACCACATGAGGAATCTCTTCCAGACCAGTGCCAACCACATGATGCTCAACATCAACATGTGGTCCACCCTGGTGCTGGGACTAGgTGTGTTGTGGACAGGTGAGGTATGGGACTTCCTGAGCTTCACAGACCGTCACCCCAGCATCTTCTGGAACATCCTTTTGTTTGGAATAACTAGTGCTTTAGGCCAGaCCTTCATCTTCATGACTGTGGTGTACTTCGGCCCTCTCACCTGCTCCATCGTCACTACCACACGGAAGTTCTTTACCATCCTGGGCTCTGTCCTTCTGTTCGGCAACGTCCTCAACACCATGCAGTGGGTCGGCACTATCCTGGTGTTCCTTGGTCTCGGGTTTGATGCCAAATTTGGCAAGACACCAAAGAAGACCACACACTAAGGAACCTGGAATATGTCATGGCAAAACTGACAAACTGAAAGTCCAGTGGACAGAAATCCATCTCTCTCTGATTTTCTTACCACATCCTGCCTAGGCAGTACACCTACATACACTTAGTCATTGTTAGTTACCATattataattgtattttttttttacataatcaTGAAAGAAGCCCCTATGTTTTCAAACGTCCCCATTCTCCTGAACCTACTAAGACAGACAAGCATCATCTACTTAGACCGCAAGACCACATCCACATGAAGAGGAAATGGGGCAGAATGAGATGGGTGGGCAGAGGAAAGATGACAACATGCACGTCAAATCCCTTGTGGTTGTTGAGGCTGCTCCTCCCTTTGGACTACATCTGAACCACACAGGCCTATGAATCTCAGCTCCAAGATTTACCTCATGAACTCATCACCAAGGAATGCCTGGTTTTCACTGAGATTTGTAACCGTAGTAAAGATATTGGTTACAGAAAAACACCCTAATTAAACGAGTCGATTGTCTTGTCAGTTAGTAGAAGTTTTCCAAGTAAAACTCTATTATCAGATCTCAAGTTGTTGAGACCTGCACAAGATTCTGAATGTTGACATGCTGTAGATGAGGAGTTTTAACACTTCCATGTAGTTGACTCAGGATGTTAGTCTTCATTTCCATTATTATCTTGGCAGACAACTAGCCTCTCTGTATTATGGAAATAATaaacataaaatactgtaaatgAACCAAATTGTTTATGATACTCATGGCCAATCTGACAGATAAATCTTGTtgcttttaaaaaataaaagtaggATATGCCATGAATACATAGTAAAAGGAAAACCATAATATGGTATCAGCATAGTTATGTTTAATAAATTGCTGTTATTGAAGGTTTTGGCCAAACTGGATGAAAATCTGCCAACGTAcaattattttccagagaattaAAACCAGATTAAATAAACAGAGGAGACATGATATGGCTTGAATCTGTGTTTTGATATGACAATTAAACAGAAGGAGACATGATATGGCTTGAATCTGTGTTTTGATATGACAATTAAACAGAAGGAGACATGATATGGCTTGAATCTGTGTTTTGATATGACAATTAAACAGAAGGAGACATGATATGGCTTGAATCTGTGTTTTGATATGACAATTAAACATGTTTTCCATGGTTCTAGGATTGGAACACCAGGCTGA

Function

NR:

description
solute carrier family 35 member B1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15275 SLC35B1; solute carrier family 35 (UDP-galactose transporter), member B1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558475.2 True 2853 mRNA 0.43 9 49571508 49577269

Neighbor

gene id symbol gene type direction distance location
LOC110486695 LOC106601598 coding upstream 3683 49558788 ~ 49567825 (+)
LOC110486691 LOC106601608 coding upstream 14331 49551722 ~ 49557177 (+)
LOC110486693 rundc3a coding upstream 20005 49533020 ~ 49551503 (+)
LOC110486690 LOC106606872 coding upstream 40775 49522530 ~ 49530733 (+)
LOC110486684 LOC106601519 coding upstream 186986 49370238 ~ 49384522 (+)
ndua4 ndua4 coding downstream 3055 49580324 ~ 49584562 (+)
LOC110486697 spop coding downstream 30210 49607479 ~ 49713614 (+)
LOC118938084 NA coding downstream 222118 49799387 ~ 49799839 (+)
LOC110486702 mien1 coding downstream 491623 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 496336 50073605 ~ 50076256 (+)
G1182809 NA non-coding upstream 2879 49568363 ~ 49568629 (+)
G1182795 NA non-coding upstream 62598 49508693 ~ 49508910 (+)
G1182784 NA non-coding upstream 102699 49467765 ~ 49468809 (+)
G1182773 NA non-coding upstream 104427 49466691 ~ 49467081 (+)
G1182772 NA non-coding upstream 105299 49465715 ~ 49466209 (+)
G1183727 NA non-coding downstream 137857 49715126 ~ 49715459 (+)
G1183729 NA non-coding downstream 155077 49732346 ~ 49732859 (+)
G1183730 NA non-coding downstream 156110 49733379 ~ 49733590 (+)
G1183737 NA non-coding downstream 158995 49736264 ~ 49736493 (+)
G1183740 NA non-coding downstream 160118 49737387 ~ 49737651 (+)
G1182742 NA other upstream 145285 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 288005 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 304737 49263529 ~ 49266771 (+)
LOC110486671 LOC100335037 other upstream 368818 49198846 ~ 49202693 (+)
G1182629 NA other upstream 452811 49114975 ~ 49118697 (+)
G1183819 NA other downstream 254952 49832221 ~ 49835014 (+)
G1183875 NA other downstream 305552 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1408544 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1806903 51384172 ~ 51394113 (+)

Expression


Co-expression Network