Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486703 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 50073605 ~ 50076256 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0045454 | cell redox homeostasis | biological_process |
| GO:0008430 | selenium binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110486703 | False | 1329 | mRNA | 0.49 | 5 | 50073605 | 50076256 |
| TU1350259 | True | 695 | lncRNA | 0.49 | 5 | 50073913 | 50075930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486702 | mien1 | coding | upstream | 1542 | 50068892 ~ 50125626 (+) |
| LOC118938084 | NA | coding | upstream | 273766 | 49799387 ~ 49799839 (+) |
| LOC110486697 | spop | coding | upstream | 359991 | 49607479 ~ 49713614 (+) |
| ndua4 | ndua4 | coding | upstream | 489052 | 49580324 ~ 49584562 (+) |
| LOC110486696 | LOC106601597 | coding | upstream | 496336 | 49571508 ~ 49577269 (+) |
| LOC100136769 | LOC100136769 | coding | downstream | 3025 | 50079281 ~ 50090662 (+) |
| LOC110486704 | ubtf | coding | downstream | 15081 | 50091337 ~ 50113963 (+) |
| LOC110486708 | LOC106606819 | coding | downstream | 38112 | 50114368 ~ 50123426 (+) |
| LOC110486706 | LOC106601646 | coding | downstream | 54188 | 50130444 ~ 50135992 (+) |
| LOC110486711 | asic2 | coding | downstream | 76124 | 50152380 ~ 50600432 (+) |
| G1183980 | LOC106606868 | non-coding | upstream | 9246 | 50063540 ~ 50064359 (+) |
| G1183973 | NA | non-coding | upstream | 30258 | 50043138 ~ 50043347 (+) |
| G1183972 | NA | non-coding | upstream | 30603 | 50042720 ~ 50043002 (+) |
| G1183890 | NA | non-coding | upstream | 99071 | 49970762 ~ 49974534 (+) |
| G1183891 | NA | non-coding | upstream | 102873 | 49970497 ~ 49970732 (+) |
| G1184046 | NA | non-coding | downstream | 142796 | 50219052 ~ 50220138 (+) |
| G1184078 | NA | non-coding | downstream | 190767 | 50267023 ~ 50267498 (+) |
| G1184178 | NA | non-coding | downstream | 341440 | 50417696 ~ 50418945 (+) |
| G1184296 | NA | non-coding | downstream | 524693 | 50600949 ~ 50601164 (+) |
| G1183875 | NA | other | upstream | 190170 | 49882821 ~ 49883435 (+) |
| G1183819 | NA | other | upstream | 238591 | 49832221 ~ 49835014 (+) |
| G1182742 | NA | other | upstream | 647382 | 49419570 ~ 49426223 (+) |
| LOC110486677 | LOC106601591 | other | upstream | 790102 | 49281106 ~ 49284116 (+) |
| G1184435 | LOC106606845 | other | downstream | 909557 | 50985813 ~ 50986566 (+) |
| LOC110487554 | LOC106601638 | other | downstream | 1307916 | 51384172 ~ 51394113 (+) |
| G1185436 | NA | other | downstream | 1369651 | 51445907 ~ 51446557 (+) |
| G1185521 | NA | other | downstream | 1551426 | 51627682 ~ 51628676 (+) |
| G1185527 | NA | other | downstream | 1575357 | 51651613 ~ 51653770 (+) |
