LOC110486760 (LOC101074561)



Basic Information


Item Value
gene id LOC110486760
gene name LOC101074561
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51581861 ~ 51585591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021558579.2
agcactTGAGTCGCAGCGGCCTCATCAGAAAATCTCGTTCTTTCAAGTGATAGCCGGACACTTTCACTTGGCCGTTGGACAGACCTCGCAGACATGTCGAATAACAGCGCAAACAGCAGCAACTTGGTTATAGCTCAGAAGGTGGTAAAACAACTTCGCCTAGAGGCGAGTGTTCGCAGGATCAAGGTGTCCCAGGCAGCAGCGGACCTGAAGACCTTCTGCCTGCAGAACGCCCATAAAGACCCTCTCCTCATGGGGGTGCCCTCCAGCGACAACCCCTTCAGACCCCCCAAGTCCTGCGCCCTCTTCTGAGGCGATGGTGATGATGGAGGCTTGTAAAACACGTCTGAACATTCCCCAAGGATGCCTTTCAGTTCCAAGCCCCTGGCGTCTCCTACACCCTTCCCCACCACGTCCAGTCACTGAAGACCTCAAGGCCAGAACACAATCACAGGCATTAACCCTATGCTGAGTGAGTTTTGacatgtgttctgttctgttctacagcTCAATAAGGATAACATTTGCAGTCCTTTGTGTGTTGAGATCATTAGAATGAAAGCACTCCTCAAAGTATAAATATGGCAGTCTCTCCCTGTAGTCTCTAccttttgttacttttattttactCAAAGTGAAATTGAACTGTATTAGGTTTTACATATTGTTGTTGGTGAGTCTTTTAAAGTGGTTGACCAAGTGCCATTACATGAGTATAGCCTACCGTATCATTGTTGTGAAGCTACTGTATGTTCAACACACTACAAGATATTACACCTGAGTTTGATCTCAGAGCTTGTTTTTCAAAATGGTGCTCAGTTGGTTGCAAACACAATGCAAAGTTCCACACAAGCTCGCCTTAACACTGTCACTGTGATTTTTGTCAGATGAAATTGTGAAGCATTTCAATAAGTGTAATTTATGATTCTCTGCTAAAAGTGTGGTGACTCCATGAGCCTCAAGAGAATTTAGTCTTTTGACAGAAATTTTGCGCGCATTCTCATGTGTTAAACACTCGACTACACTGTTAAGATCCTCAGTTGACAGTTAAACCACTGTGATGCAACATTTAATTCAAAAGAAAATGGTGTTACTATGTCTTGAAAAGAGTGACTCAGATGTTAGAGGTTTCTTATGGGTGTTGGCATATAGAGATCTCAAACTCAGGTCATGCAAAATATCTGTTTCAATGCTGGTTTTGTGGTGTTGCTCAGTCAACATCAGAATAATGATATGAAGGATCATAACAAGAATATTAGGATTACTGTACTGACACTATAGATAAGTATAATTGCTGTGTATCATCATTATAAATAAGCCTGATCTTAGGACACTCAGTGGAAGGGGACTGCTACTCCATTGGTGCATCTACGTTAAAGTAAGGACACATTCTAAATGGTTTAAAGTCATTTTTTGGGTTCCCCACCCCTTTTACCTTTTACTCTTTGCGTACTGCTTCAAACTAATGTGCCTTAGTATGTGCCAAACCTCTGGTAATTTAAATGCCCCGGTTTTAACACGAGACCTGTTGAGGCCTAAATCTGCAGGACCTGAAGAAGTTGAAAAACAACACCAGAGAATGAGTCATGTTTAGGAACCATACTGTGTTCTTATTACAACATGAAGTGTTGCTAAAAACTGGAGAACAGCCCTTCAACATGTTCCAATACCCAGAAACATGTCTTCAATAATGTCCTCAGACTTGTCCACTGATAGGTGAAAGGACTAGGCCTACATAGATGTTCACAGTACTATTAGTCTTGCCTACCAAGTCCTTTCAAATCAGTGGCCATGCAGGAAAGGAGATGGAGGAACGCAAGCTCTTTTCACTATGGTGACAGAGACTGATCTCTGAATTCCTCTGACGTTATAATAAAGTGAACAGAGAACCTTTGAGGACTACAGTGTCCATAATGCATGGGGAAAGCAGAGCACCTCTTTTTACAAATATTAGTCACTGAAATGCTCTGGTGGATGGATTCATACATGTGGAAAACACTGTCATCCTCTTGTGCCTTAACGTTTattttgtgtgtatttgtcttaGAATGGTACCATGACATGTATTGActgaaaaatgtaataaaatgtataATTTCACCTTA
>TU1352594
GTGATAGCCGGACACTTTCACTTGGCCGTTGGACAGACCTCGCAGACATGTCGAATAACAGCGCAAACAGCAGCAACTTGGTTATAGCTCAGAAGGTGGTAAAACAACTTCGCCTAGAGGCGAGTGTTCGCAGGATCAAGGTGTCCCAGGCAGCAGCGGACCTGAAGACCTTCTGCCTGCAGAACGCCCATAAAGACCCTCTCCTCATGGGGGTGCCCTCCAGCGACAACCCCTTCAGACCCCCCAAGTCCTGCGCCCTCTTCTGAGGCGATGGTGATGATGGAGGCTTGTAAAACACGTCTGAACATTCCCCAAGGATGCCTTTCAGTTCCAAGCCCCTGGCGTCTCCTACACCCTTCCCCACCACGTCCAGTCACTGAAGACCTCAAGGCCAGAACACAATCACAGGCATTAACCCTATGCTGAGTGAGTTTTGacatgtgttctgttctgttctacagcTCAATAAGGATAACATTTGCAGTCCTTTGTGTGTTGAGATCATTAGAATGAAAGCACTCCTCAAAGTATAAATATGGCAGTCTCTCCCTGTAGTCTCTAccttttgttacttttattttactCAAAGTGAAATTGAACTGTATTAGGTTTTACATATTGTTGTTGGTGAGTCTTTTAAAGTGGTTGACCAAGTGCCATTACATGAGTATAGCCTACCGTATCATTGTTGTGAAGCTACTGTATGTTCAACACACTACAAGATATTACACCTGAGTTTGATCTCAGAGCTTGTTTTTCAAAATGGTGCTCAGTTGGTTGCAAACACAATGCAAAGTTCCACACAAGCTCGCCTTAACACTGTCACTGTGATTTTTGTCAGATGAAATTGTGAAGCATTTCAATAAGTGTAATTTATGATTCTCTGCTAAAAGTGTGGTGACTCCATGAGCCTCAAGAGAATTTAGTCTTTTGACAGAAATTTTGCGCGCATTCTCATGTGTTAAACACTCGACTACACTGTTAAGATCCTCAGTTGACAGTTAAACCACTGTGATGCAACATTTAATTCAAAAGAAAATGGTGTTACTATGTCTTGAAAAGAGTGACTCAGATGTTAGAGGTTTCTTATGGGTGTTGGCATATAGAGATCTCAAACTCAGGTCATGCAAAATATCTGTTTCAATGCTGGTTTTGTGGTGTTGCTCAGTCAACATCAGAATAATGATATGAAGGATCATAACAAGAATATTAGGATTACTGTACTGACACTATAGATAAGTATAATTGCTGTGTATCATCATTATAAATAAGCCTGATCTTAGGACACTCAGTGGAAGGGGACTGCTACTCCATTGGTGCATCTACGTTAAAGTAAGGACACATTCTAAATGGTTTAAAGTCATTTTTTGGGTTCCCCACCCCTTTTACCTTTTACTCTTTGCGTACTGCTTCAAACTAATGTGCCTTAGTATGTGCCAAACCTCTGGTAATTTAAATGCCCCGGTTTTAACACGAGACCTGTTGAGGCCTAAATCTGCAGGACCTGAAGAAGTTGAAAAACAACACCAGAGAATGAGTCATGTTTAGGAACCATACTGTGTTCTTATTACAACATGAAGTGTTGCTAAAAACTGGAGAACAGCCCTTCAACATGTTCCAATACCCAGAAACATGTCTTCAATAATGTCCTCAGACTTGTCCACTGATAGGTGAAAGGACTAGGCCTACATAGATGTTCACAGTACTATTAGTCTTGCCTACCAAGTCCTTTCAAATCAGTGGCCATGCAGGAAAGGAGATGGAGGAACGCAAGCTCTTTTCACTATGGTGACAGAGACTGATCTCTGAATTCCTCTGACGTTATAATAAAGTGAACAGAGAACCTTTGAGGACTACAGTGTCCATAATGCATGGGGAAAGCAGAGCACCTCTTTTTACAAATATTAGTCACTGAAATGCTCTGGTGGATGGATTCATACATGTGGAAAACACTGTCATCCTCTTGTGCCTTAACGTTTattttgtgtgtatttgtcttaGAATGGTACCATGACATGTATTGActgaaaaatgtaataaaatgtataATTTCACCTT

Function


NR:

description
Guanine nucleotide-binding protein GI/GS/GO subunit gamma-5 precursor

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021558579.2 False 2105 mRNA 0.42 3 51581861 51585591
TU1352594 True 2058 lncRNA 0.42 3 51581862 51585545

Neighbor


gene id symbol gene type direction distance location
carm1 carm1 coding downstream 656 51566960 ~ 51581205 (-)
timm29 LOC106606779 coding downstream 19396 51559667 ~ 51562465 (-)
LOC118938317 NA coding downstream 51100 51526614 ~ 51530761 (-)
LOC118938316 NA coding downstream 59164 51518910 ~ 51522697 (-)
LOC110486743 LOC106601710 coding downstream 73210 51470090 ~ 51508651 (-)
LOC110486749 LOC106601716 coding upstream 6568 51592159 ~ 51607002 (-)
LOC118938556 NA coding upstream 515294 52100885 ~ 52101957 (-)
LOC110485216 NA coding upstream 570049 52155640 ~ 52331576 (-)
LOC110538721 NA coding upstream 600966 52186557 ~ 52189703 (-)
LOC110486769 gtf2f1 coding upstream 829728 52415319 ~ 52430034 (-)
G1186189 NA non-coding downstream 28229 51553418 ~ 51553632 (-)
G1186183 NA non-coding downstream 37502 51544056 ~ 51544359 (-)
G1186182 NA non-coding downstream 40443 51541002 ~ 51541418 (-)
G1186175 NA non-coding downstream 48323 51533291 ~ 51533538 (-)
G1186214 NA non-coding upstream 40071 51625662 ~ 51626441 (-)
G1186085 NA non-coding upstream 42140 51627731 ~ 51628433 (-)
G1186222 NA non-coding upstream 45197 51630788 ~ 51653059 (-)
G1186224 NA non-coding upstream 46103 51631694 ~ 51649513 (-)
G1186218 NA non-coding upstream 91427 51677018 ~ 52085973 (-)
G1186154 NA other downstream 91620 51489777 ~ 51490241 (-)
G1186075 NA other downstream 207907 51352309 ~ 51373954 (-)
G1186080 NA other downstream 257930 51321800 ~ 51323931 (-)
G1185046 NA other downstream 800003 50780265 ~ 50781858 (-)
LOC110485208 LOC106606837 other downstream 823817 50732097 ~ 50824433 (-)
G1186381 NA other upstream 339372 51924963 ~ 52030660 (-)
G1186216 NA other upstream 425099 52010690 ~ 52011211 (-)
G1186670 LOC100194703 other upstream 1073740 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 2021433 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 2221053 53806640 ~ 54049592 (-)

Expression



Co-expression Network