LOC118938088


Basic Information

Item Value
gene id LOC118938088
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51840452 ~ 51852886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118938088
ATGTTCCCTGCATCTCTACTGCTGATGCTGGCAGCTGCCTCCTgtGTCCACAGTCAGGTTGTACTCACACAGGCTGAGCAGTCGGTCCAGGGGACCCCTGCAGGATCCCTCAAACTCAGATATATACACAGCATTAGTTTGACCTCCTCCCCTGCTCAACTCAAACCTCCTGGAGAGTCAGTGAAACTATCTTGCCAAGTCTCTGGCTATGTCCTGACAGACTATGGCACAGCTTGGATACGACAGCAGCCAGGGAAAACACTGGAGTGGATTGGGATCATCTGGGGTGGTGGATCCATCAACTCTGGGGCCTCTTTTAAGAGCAGATTCACCATCTCCAGAGACAgtagtaatgtactgtacttaGACATCACCAGTCTGCAGGCTGAGGACACAGCTGTTTCAGCTTCAACACAAAGCCTGTTCCCTGattctctgctgctgctgttggcagctgtttcctGTGTACACTGTGGTCTGGAGCTCACCCAGCCGAGTTCAATGGTTATAAATTCTGGAGTCTTTGGTAATCACCTGTAAGGTCTCCGGGTATTCTCTGACTGATAGCACCAACCTCTATAGAGTATCATGGGTCCAACCTGAAGGCATTATAACAGAGTGGGTTGGGAACATCTACTGTTTCACGATGCAGGCACAGCTTACAAAGATTATCTTAAACACAAGTTCAGCTTGACCAGAGACATTTTAAGAGGCACAGTGGCTTTAATAGGACAGTCTGCAGACTGAAGATTCAGCTGTGTATAACTGTTCTCGTTACCACAGTGATACAAACAAGCACAAAATTGATAAACTGAAAAACAAATTCAGTATCTCCAGAGACATGTCCAGCATCACAATGACTTTAACAGGACAGAGTCTGCAGACTGAAGACACAGCTCTGTATTATTGTGCTCGCCATCCATACTGA

Function

NR:

description
immunoglobulin mu heavy chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118938088 True 928 mRNA 0.47 6 51840452 51852886

Neighbor

gene id symbol gene type direction distance location
LOC118938318 LOC106606767 coding upstream 16495 51783888 ~ 51823957 (+)
LOC118938087 NA coding upstream 75836 51760793 ~ 51765924 (+)
LOC110486751 LOC106606781 coding upstream 249956 51586246 ~ 51590496 (+)
LOC110486745 LOC106601712 coding upstream 274121 51562364 ~ 51566331 (+)
LOC110486737 LOC106606772 coding upstream 435872 51394436 ~ 51404580 (+)
LOC110486748 NA coding downstream 83156 51779397 ~ 51941040 (+)
LOC110486763 NA coding downstream 99230 51952116 ~ 51954859 (+)
LOC110485215 LOC106606764 coding downstream 195258 52014531 ~ 52091683 (+)
LOC110486764 LOC106606789 coding downstream 268597 52121483 ~ 52139499 (+)
LOC110486765 LOC106606792 coding downstream 288387 52141273 ~ 52142730 (+)
G1185623 NA non-coding upstream 103936 51731961 ~ 51736516 (+)
G1185578 NA non-coding upstream 119463 51604070 ~ 51720989 (+)
G1185564 carm1 non-coding upstream 263697 51574021 ~ 51576755 (+)
G1185534 LOC106606779 non-coding upstream 279085 51559721 ~ 51561367 (+)
G1185510 NA non-coding upstream 286516 51553700 ~ 51553936 (+)
G1185538 NA non-coding downstream 9707 51862593 ~ 51864290 (+)
G1185714 NA non-coding downstream 72203 51925089 ~ 51930454 (+)
G1185722 NA non-coding downstream 103284 51956170 ~ 52023060 (+)
G1185726 NA non-coding downstream 118087 51970973 ~ 51975692 (+)
G1185519 NA non-coding downstream 216939 52069825 ~ 52070857 (+)
G1185539 NA other upstream 106128 51733649 ~ 51734324 (+)
G1185616 NA other upstream 122248 51717748 ~ 51718204 (+)
G1185535 NA other upstream 141806 51697876 ~ 51698646 (+)
G1185522 NA other upstream 145394 51693883 ~ 51695058 (+)
G1185531 NA other downstream 16415 51869301 ~ 51880953 (+)
G1185687 NA other downstream 28502 51881388 ~ 51881976 (+)
G1185525 NA other downstream 46070 51898956 ~ 51899716 (+)
G1185528 NA other downstream 110537 51963423 ~ 51965490 (+)

Expression


Co-expression Network