Item | Value |
---|---|
gene id | LOC110485215 |
gene name | LOC106606764 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 52014531 ~ 52091683 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
IgM heavy chain membrane bound form |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036941452.1 | False | 4539 | mRNA | 0.48 | 13 | 52048144 | 52091683 |
XM_036941451.1 | False | 3811 | mRNA | 0.49 | 13 | 52065978 | 52091683 |
XM_036941450.1 | False | 3862 | mRNA | 0.49 | 13 | 52066132 | 52091683 |
XM_036941449.1 | False | 3993 | mRNA | 0.48 | 13 | 52066336 | 52091683 |
XM_036941453.1 | False | 4037 | mRNA | 0.48 | 13 | 52066676 | 52091683 |
TU1351973 | False | 1245 | TUCP | 0.44 | 5 | 52014531 | 52069615 |
TU1351972 | False | 1409 | TUCP | 0.43 | 5 | 52046133 | 52069615 |
TU1351975 | False | 1654 | TUCP | 0.42 | 5 | 52046705 | 52069615 |
TU1351964 | True | 1460 | TUCP | 0.43 | 5 | 52048143 | 52069615 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486763 | NA | coding | upstream | 93285 | 51952116 ~ 51954859 (+) |
LOC110486748 | NA | coding | upstream | 107104 | 51779397 ~ 51941040 (+) |
LOC118938088 | NA | coding | upstream | 195258 | 51840452 ~ 51852886 (+) |
LOC118938318 | LOC106606767 | coding | upstream | 224187 | 51783888 ~ 51823957 (+) |
LOC118938087 | NA | coding | upstream | 283528 | 51760793 ~ 51765924 (+) |
LOC110486764 | LOC106606789 | coding | downstream | 29800 | 52121483 ~ 52139499 (+) |
LOC110486765 | LOC106606792 | coding | downstream | 49590 | 52141273 ~ 52142730 (+) |
LOC110486767 | alkb7 | coding | downstream | 283141 | 52374824 ~ 52390015 (+) |
LOC110485217 | fcl | coding | downstream | 314494 | 52406177 ~ 52414576 (+) |
LOC118938557 | LOC106601687 | coding | downstream | 352306 | 52443989 ~ 52444998 (+) |
G1185722 | NA | non-coding | upstream | 25084 | 51956170 ~ 52023060 (+) |
G1185726 | NA | non-coding | upstream | 72452 | 51970973 ~ 51975692 (+) |
G1185714 | NA | non-coding | upstream | 117690 | 51925089 ~ 51930454 (+) |
G1185538 | NA | non-coding | upstream | 183854 | 51862593 ~ 51864290 (+) |
G1185774 | NA | non-coding | downstream | 1692 | 52093375 ~ 52093611 (+) |
G1185775 | NA | non-coding | downstream | 3018 | 52094701 ~ 52095145 (+) |
G1185782 | NA | non-coding | downstream | 10694 | 52102377 ~ 52102600 (+) |
G1185783 | NA | non-coding | downstream | 11115 | 52102798 ~ 52103079 (+) |
G1185793 | NA | non-coding | downstream | 13114 | 52104797 ~ 52107657 (+) |
G1185528 | NA | other | upstream | 82654 | 51963423 ~ 51965490 (+) |
G1185525 | NA | other | upstream | 148428 | 51898956 ~ 51899716 (+) |
G1185687 | NA | other | upstream | 166168 | 51881388 ~ 51881976 (+) |
G1185531 | NA | other | upstream | 167191 | 51869301 ~ 51880953 (+) |
G1185530 | NA | other | upstream | 200764 | 51830790 ~ 51847380 (+) |
G1185815 | NA | other | downstream | 83583 | 52175266 ~ 52176505 (+) |
G1185855 | NA | other | downstream | 182647 | 52274330 ~ 52355941 (+) |
LOC110539012 | LOC106606743 | other | downstream | 912369 | 52907896 ~ 53046938 (+) |
G1185623 | NA | non-coding | upstream | 278015 | 51731961 ~ 51736516 (+) |
G1185519 | NA | non-coding | downstream | 210 | 52069825 ~ 52070857 (+) |
G1185541 | NA | non-coding | downstream | 2625 | 52072240 ~ 52074041 (+) |