LOC118938557 (LOC106601687)


Basic Information

Item Value
gene id LOC118938557
gene name LOC106601687
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52443989 ~ 52444998 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035768.1
ATGCTGGCTGAAGCCAGAACAATACTTTACCTGGGCTGTGTTAGGGCCAGTGTGTACTGTCCTAGCACTGAACTGGATATTGTTCTGCGTTACAATCTGGAGTTTGAGACCTACCTTGGCTAACATGAAGAGTGATGTCTCACAGTCCAAagacaccagaCTGATCATCTTTAAGATCCTGGCACAGTTTGTGATCCTGGGTTGTACCTGGGTGCTGGGCTTGTTCCAGTCCACCATGGTCTTCAAGTACCTCTTCATCGTGCTCAACTCCCAGCAGGGCACCTTC

Function

NR:

description
PREDICTED: adhesion G protein-coupled receptor E1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035768.1 True 286 mRNA 0.49 3 52443989 52444998

Neighbor

gene id symbol gene type direction distance location
LOC110485217 fcl coding upstream 29413 52406177 ~ 52414576 (+)
LOC110486767 alkb7 coding upstream 53974 52374824 ~ 52390015 (+)
LOC110486765 LOC106606792 coding upstream 301259 52141273 ~ 52142730 (+)
LOC110486764 LOC106606789 coding upstream 304490 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 coding upstream 352306 52014531 ~ 52091683 (+)
LOC110486773 LOC106601688 coding downstream 7796 52452794 ~ 52612169 (+)
LOC110486772 NA coding downstream 167250 52612244 ~ 52616224 (+)
LOC118938093 NA coding downstream 240865 52685863 ~ 52688094 (+)
LOC110486774 sgsm3 coding downstream 260553 52705551 ~ 52731809 (+)
leg leg coding downstream 304850 52749848 ~ 52753917 (+)
G1185887 NA non-coding upstream 40309 52403022 ~ 52403680 (+)
G1185900 NA non-coding upstream 84511 52350048 ~ 52359478 (+)
G1185898 NA non-coding upstream 97088 52346113 ~ 52346901 (+)
G1185841 NA non-coding upstream 185788 52257351 ~ 52258201 (+)
G1185788 NA non-coding upstream 197451 52244813 ~ 52246538 (+)
G1185940 NA non-coding downstream 39481 52484479 ~ 52485136 (+)
G1185921 NA non-coding downstream 172696 52617694 ~ 52621551 (+)
G1185919 NA non-coding downstream 176684 52621682 ~ 52624208 (+)
G1185855 NA other upstream 88048 52274330 ~ 52355941 (+)
G1185815 NA other upstream 267484 52175266 ~ 52176505 (+)
LOC110539012 LOC106606743 other downstream 559054 52907896 ~ 53046938 (+)
LOC110538743 LOC106601732 other downstream 1001425 53445335 ~ 53450473 (+)
G1187452 NA other downstream 1743569 54188567 ~ 54198015 (+)
G1187390 NA other downstream 1819068 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 1846587 54272638 ~ 54300365 (+)

Expression


Co-expression Network