Item | Value |
---|---|
gene id | LOC110486776 |
gene name | LOC106606809 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 52730378 ~ 52741555 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: GTP-binding protein 1-like isoform X1 |
id | name | namespace |
---|---|---|
GO:0006184 | obsolete GTP catabolic process | biological_process |
GO:0003924 | GTPase activity | molecular_function |
GO:0005525 | GTP binding | molecular_function |
id | description |
---|---|
K24887 | GTPBP1; GTP-binding protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005035593.1 | False | 5430 | mRNA | 0.48 | 15 | 52730378 | 52741276 |
XR_005035594.1 | False | 5364 | mRNA | 0.48 | 15 | 52730378 | 52741276 |
XR_005035595.1 | False | 5314 | mRNA | 0.48 | 15 | 52730378 | 52741276 |
XM_036941469.1 | False | 5674 | mRNA | 0.47 | 13 | 52730378 | 52741513 |
XM_036941468.1 | True | 5767 | mRNA | 0.47 | 14 | 52730378 | 52741555 |
52,726,000
52,728,000
52,730,000
52,732,000
52,734,000
52,736,000
52,738,000
52,740,000
52,742,000
52,744,000
52,746,000
52,748,000
52,750,000
52,752,000
NC_048577.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486769 | gtf2f1 | coding | downstream | 300344 | 52415319 ~ 52430034 (-) |
LOC110485216 | NA | coding | downstream | 398802 | 52155640 ~ 52331576 (-) |
LOC110538721 | NA | coding | downstream | 540675 | 52186557 ~ 52189703 (-) |
LOC118938556 | NA | coding | downstream | 628421 | 52100885 ~ 52101957 (-) |
LOC110486749 | LOC106601716 | coding | downstream | 1123376 | 51592159 ~ 51607002 (-) |
LOC110485222 | LOC106601739 | coding | upstream | 352111 | 53093666 ~ 53107919 (-) |
LOC110538731 | LOC106592182 | coding | upstream | 504839 | 53246394 ~ 53250376 (-) |
LOC110539023 | LOC106601728 | coding | upstream | 616805 | 53358360 ~ 53417730 (-) |
LOC118938325 | LOC106606746 | coding | upstream | 688477 | 53430032 ~ 53440075 (-) |
LOC110538745 | LOC106606750 | coding | upstream | 708999 | 53450554 ~ 53456191 (-) |
G1186669 | NA | non-coding | downstream | 72088 | 52658015 ~ 52658290 (-) |
G1186664 | NA | non-coding | downstream | 80964 | 52649146 ~ 52649414 (-) |
G1186661 | NA | non-coding | downstream | 85781 | 52644374 ~ 52644597 (-) |
G1186658 | NA | non-coding | downstream | 94789 | 52635287 ~ 52635589 (-) |
G1186656 | NA | non-coding | downstream | 98745 | 52631415 ~ 52631633 (-) |
G1186736 | NA | non-coding | upstream | 30260 | 52771815 ~ 52772021 (-) |
G1186820 | NA | non-coding | upstream | 35192 | 52776747 ~ 52777022 (-) |
G1186826 | NA | non-coding | upstream | 52045 | 52793600 ~ 52866860 (-) |
G1186856 | NA | non-coding | upstream | 181110 | 52922665 ~ 52924164 (-) |
G1186957 | NA | non-coding | upstream | 234494 | 52976049 ~ 52976614 (-) |
G1186670 | LOC100194703 | other | downstream | 70569 | 52659331 ~ 52659809 (-) |
G1186381 | NA | other | downstream | 699718 | 51924963 ~ 52030660 (-) |
G1186216 | NA | other | downstream | 719167 | 52010690 ~ 52011211 (-) |
G1186154 | NA | other | downstream | 1240137 | 51489777 ~ 51490241 (-) |
G1186075 | NA | other | downstream | 1356424 | 51352309 ~ 51373954 (-) |
mosmoa | C20H16orf52 | other | upstream | 865469 | 53607021 ~ 53638313 (-) |
si:ch73-374l24.1 | LOC105026133 | other | upstream | 1065089 | 53806640 ~ 54049592 (-) |
G1188147 | NA | other | upstream | 1707328 | 54448883 ~ 54450020 (-) |
G1188127 | LOC106601757 | other | upstream | 1723978 | 54409911 ~ 54470838 (-) |
G1188186 | LOC106588841 | other | upstream | 1857846 | 54599401 ~ 54600449 (-) |