Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110515633 |
| gene name | LOC106601742 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 53658770 ~ 53662221 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NHP2-like protein 1, partial |
| id | name | namespace |
|---|---|---|
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036939766.1 | True | 702 | mRNA | 0.46 | 2 | 53658770 | 53662221 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538749 | LOC106580644 | coding | upstream | 24605 | 53626034 ~ 53634165 (+) |
| trnal-uag-2 | NA | coding | upstream | 113206 | 53545483 ~ 53545564 (+) |
| cdr2a | LOC106606747 | coding | upstream | 180486 | 53464210 ~ 53478284 (+) |
| LOC110538736 | LOC106606748 | coding | upstream | 200149 | 53456336 ~ 53458621 (+) |
| LOC110538743 | LOC106601732 | coding | upstream | 208297 | 53445335 ~ 53450473 (+) |
| LOC110486792 | LOC106601749 | coding | downstream | 28239 | 53690460 ~ 53694370 (+) |
| LOC110486793 | LOC106601743 | coding | downstream | 45102 | 53707323 ~ 53712693 (+) |
| LOC110486795 | NA | coding | downstream | 61926 | 53724147 ~ 53727783 (+) |
| cyth3b | LOC105026136 | coding | downstream | 80906 | 53743127 ~ 53791552 (+) |
| LOC110538759 | NA | coding | downstream | 379524 | 54041745 ~ 54046402 (+) |
| G1187245 | LOC106606732 | non-coding | upstream | 5157 | 53641900 ~ 53653613 (+) |
| G1187192 | NA | non-coding | upstream | 215950 | 53442564 ~ 53442820 (+) |
| G1187173 | NA | non-coding | upstream | 230730 | 53427418 ~ 53428040 (+) |
| G1187167 | NA | non-coding | upstream | 237728 | 53420774 ~ 53421042 (+) |
| G1187163 | NA | non-coding | upstream | 245669 | 53411591 ~ 53413101 (+) |
| G1187253 | NA | non-coding | downstream | 6195 | 53668416 ~ 53669862 (+) |
| G1187259 | NA | non-coding | downstream | 14288 | 53676509 ~ 53766636 (+) |
| G1187244 | NA | non-coding | downstream | 50903 | 53713124 ~ 53716000 (+) |
| G1187271 | NA | non-coding | downstream | 54085 | 53716306 ~ 53720111 (+) |
| LOC110539012 | LOC106606743 | other | upstream | 635789 | 52907896 ~ 53046938 (+) |
| LOC110486767 | alkb7 | other | upstream | 1269574 | 52374824 ~ 52390015 (+) |
| G1185855 | NA | other | upstream | 1302829 | 52274330 ~ 52355941 (+) |
| G1185815 | NA | other | upstream | 1482265 | 52175266 ~ 52176505 (+) |
| G1187452 | NA | other | downstream | 526346 | 54188567 ~ 54198015 (+) |
| G1187390 | NA | other | downstream | 601845 | 54264066 ~ 54265028 (+) |
| axin2 | LOC105026129 | other | downstream | 629364 | 54272638 ~ 54300365 (+) |
| G1188344 | NA | other | downstream | 1331453 | 54993674 ~ 54997295 (+) |
| G1188386 | NA | other | downstream | 1459040 | 55121261 ~ 55122619 (+) |
