si:ch73-374l24.1 (LOC105026133)


Basic Information

Item Value
gene id si:ch73-374l24.1
gene name LOC105026133
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53806640 ~ 54049592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941514.1
CTTAGAATGAAAAAGAAGCGCTCAGCGGTGGCTCTAGCAAAAGGGAAACCCGCTGTCCAGTGGCTATTTCGCAGTTGCGGTAGCCTATAGTATTTTAGTGAGCGTGTAGAAATACAAGTGAAGATTCCTTGGAGTAAAACTGAACCGTACGACCGTGTAGCCTACTTTTTTTTGCAATGGCTGATCATCATCTTTTACATTATAGCGACTCAGCTGCGGTTGGGAACCGTTTCGCCCGCAAAGGTGCTCTGCGGCAGAAAAACGTGCATGAAGTCAAAAATCACAAATTTACTGCCAGGTTTTTCAAGCAACCGACATTCTGCAGTCATTGCACAGACTTCATATGGGGATTTGGGAAACAAGGATTCCAGTGCCAAGTGTGCTGTTTTGTGGTCCACAAAAGGTGCCATGAGTTTGTCACGTTCTCTTGCCCTGGAGCCGACAAAGGCCCCGACACAGATgacCCCAGAAGCAAGCACAAGTTTAAGATCCACTCGTACGGCAGTCCCACGTTCTGCGACCACTGTGGCTCCCTCCTCTATGGACTCATCCACCAGGGGATGAAATGCGACAccTGCGACATGAACGTACACAATCAGTGTGTGATGAACGTGCCAAGCCTGTGTGGGACAGACCACACGGAGCGCAGAGGACGCATCTTCCTCAAGATCGACGTCAGCGGAGACAGGCTACACGTCACAGtggggGAAGCCAGAAACCTGATCCCCATGGACCCTAACGGTCTGTCTGACCCCTACGTGAAGCTCAAGCTCATCCCTGACCCCAAGAACGAGACCAAACAGAAGACCAGGACCATACGCTCCTCACTCAACCCCACCTGGAATGAGTCTTTCAgcttTAAGCTGAAGGTAATGGATAAGGACCGTCGTCTGTCTATAGAGGTGTGGGACTGGGACCGTACCACCAGGAACGACTTCATGGGCTCAATGTCGTTCGGTGTGTCTGAACTCATCAAGTCCCCCGCCTGCGGCTGGTACAAGATGCTGTGCCAGGAGGAAGGGGAGTACTACAACGTTCCCATCCCTGAGATCGACGACGTCAACATGGAGCTCAGGCATAAGTttgagAAAGCCAAGCTGGGCCATGGGAAGAAAGTGATTACGCCAGCGGACCACAGACGGTTCAGCTCGGACCGCACCGTGCCCGGAATGGACCGTGTCCGACTCAGTGACTTCAACTTTCTGGCTCTGCTGGGGAAGGGCAGCTTTGGCAAGGTGATGCTGGCAGAGATGAAGTCCACAGAGGAGCTGTACGCCGTCAAGATCCTGAAGAAGGACGTGGTGATCCAGGATGATGATGTGGAGTGTACCATGGTGGAGAAGAGAGTCCTGGCCCAGAGAGACAAACCACCGTTCCTCACTGCACTCCACTCCTGCTTTCAGACTGTGGATCGTCTGTACTTTGTGATGGAGTATATTAACGGAGGGGACCTCATGTACCACATTCAGCGTGTGGGCAAGTTCAAGGAGCCACAGGCAGTGTTCTATGCTGCAGAGATCGCTGTGGGCCTGTTCTTCCTGCACAGAAAGGGTGTTGTATACAGGGACCTCAAATTGGACAACGTGATGCTGGACTCTGAGGGCCACATTAAGATAGCAGACTTTGGCATGTGTAAGGAGAACATGTATGAAGGCATGGTCACACGCACTTTCTGTGGTACCCCCGACTATATCGCCCCAGAGATCATTGCATATCAGCCCTATGGGAAATCAGTGGACTGGTGGGCTTATGGGGTTCTCCTCTACGAGATGCTAGCAGGACAGCCGCCGTTCGAtggagaggatgaagatgagtTGTTCCAGTCCATCATGGAGCACAACGTGTCCTACCCCAAGTCTATGTCTAAGGAAGCTGTCGTCATCTGCAAGGGATTCATGACCAAGCACCCATCAAAGCGTCTGGGCTGTGGTCTGGAGGGCGAGAGGGACATCCGGGAGCAGGCCTTCTTCAGACGTATCGACTGGGACCGCCTCGCCAACAGAGAGATCCAACCGCCATTCAAGCCTAAAacgggcGGCAAAGGAGCAGAAAACTTTGACAAGTTCTTCACACGCACCCAGCCCATGTTGACCCCTCCAGACCAGCTAGTCATCGCCAACATTGACCAGAGCGACTTCGCTGGTTTCTCCTACATCAACCCACAGTTCATCCACCCTTCCCTCCTTCACAGTGTGGTATGAGGGGATAgatcagggagaggaggaagagagagaaagaggttggtgagagagcaagagaaagagagagagggggagaagagagccatgtggactgggactgggacagcAACCCTCCACATTGACCACCAATCCCCTATTGTCCCTTTGTCAAAGAGACTAATATTATCTTCATGTGTTCTCTGGACTTCAGTCGGCGACATTCTGTAAACAAGCTGTCCGCGAACGATCTCGATTGGAATTTGTCTGATGCGATGGAGGGGGTAAGGGAGGGGTTGGTGTACAGGGGAGTATGTCTATCTGGTGATTGAGCGCAGTAATCATGGATACATTGATTTGAGAAGTAGGCCTGCAGTAAGCGTTGACAGTACAGTAAGCATTGACATGAATTGCACACTGTTACCATGGGGAACCCTTTAACTCTGCAACCTACTGGCCTAACATTCAGGAATGGGTTCCATGTTTTCCACAGTTCCAGAACCTCCTACTTGCTCTAGAACCTAGAGCCAaaccctacagtaccttcctgtccGGAAGTTGTCTGTGggactacatacagtatctcatgATTCCTCAGTGTGTTGCTATGGATAGTAAAAGAGAACTCCCTCCCTATGAAGCATGATGGAACATACCCTCCTGTCCctacctttcctctctctgttgtacctactgtactgtactgccatTTCTAAACAGTCTGCTACACCACATTCTAGATTATATTTATATACCTACAGAGAAGAGAGGTCTATTATCTACTGTTACACGAGTGCCAAAATAGAGGTGAAACAAATAATTTTATTCCAGTACATATCTATATAAACATCTACTATCTACAGCGTCCTTTTCTTACGAAATTCCTATAGTCAACTATGATGTCTTTCCTTGTGGTGAAGCCGTCAACCCTTCTGATGGTGTCAGCACGCTAAACTAAGCTCAACACCATGTTTCTCTGGCAGTTTTATTAATATACTCCAAACCCTTACCGAACGTTTACAAACCGCTATCAAACGTTTACAAAACGTTACTAAAATGTAACCCACCAAGTATAGCTGTGTCTAACCTAGTATGTTGTTAAAGAACAGCTTTTAGGTCCGTATGAACAGTTGACTGATGAAACAATGATGAACTTTTAAAGATGGTGTCCAATTTTATTTTGGGTGAAAGCACCGGTACCAATTTTCTCAGAGTTATTTAGGAGAATTTATGAGCAAGACTGAATTGAGGATATGGTTCTGTTCATAAGGTTTGCAACAACATGTAACTTGGTATTCCGGACTTCTATTTATGGGGAAAAATCTTGAACTGAGGTTCATGAGAAGACGATGTTTTGATTTTCCTACTGAAAATGCTCTTTCCATATGCACAATGCAGTTCTCGGTTGCATGCTTATTTCCTGATTCTGAAAAAGCGCTAGATGACTTTCTAGGGGCTGCAGCACACGTCTGATATTTATCATTGTGAAACCAAGTATTATGATATCTGTTGATTCATTCATTGTTGTCTGTATGAAAGTCCTACCCCACTGAAAAGCTGAATGAGATTCAGAGACTTGTTACTTATTAAACATATTCCGTATGTTTCCCTCTATACTTTTCTGTCCAGAGAGAACATTGTTTACCCTATTTGTCGACCATTTTGTAGATATCGAAAGAGCTTTTTCAAAAAGAGAAATGACTCGCAGATTTTATACCACGAACTGAATGTGCTTTTACTACCTTAGACGGGTTAAACATCTCTGTTTAGATGACTATCCCAAAAACACATGACGTTTGGCTGAATCTTTGGTAGCTTTGTTATCAGCGAAACCTTGTAATATGTATTTTCTCTATTTATCCACAGTTTGTTTTTGACTATTTTAAAGGTAGAGTCAGAGAAATGACCTTTGCACAAAAAGCATCGCGATTGCGAGAAATTGCGATGAGCAAGACTCAAGACTTCACTCTCACAAAGTCACCCACAGTATCTGTACATGGGTTCCCTTCACGCGCTTACAGAGTAGTAGGCACTGGACCAAAACTGACCCGCACTCTCAGTGTGTTGCGGAGATTGACCCACTATGCCGTTTACTTTGTGCATCTTGGTCATATCGCTGACTCTACCTTTAATGTTTCACAGACGATAtgcagtatctacagtatgtgtgaCTGTGGCGCGTGGTCCCTGGTTGAATACACTCCTACTCCTAGCCTTGGCAGAAGTGTGTTTTCTGGCTTTCGCTGTGTGCATGTGAGGGTAAGGCCTGATCTAAGCATGAGAGAAGGCATGATGCATGTTAACACAGATCCCCAGGTGTACAGTATGAAGTTCATGTGTCACCAAGCATCACAGTGAGACACACGCCTGTCCCGCTAGCCCCTCCCACTacacttctctcctctttctgttctcctcttctccattTGTTTATTGGTTTGTCTTAGTGTTCAGTCTCCTGACTCAACCAAGTTCTAAATTCAGTCAGAACTCACATCTAAGCCATGGACACAACGATTTGAATTTTCTGTCTCTTCTGTTTTGGTTGTGGTTATGTAGAAGATCTCTTTCTGTGCCAGACTGTGAACCTACATAATGAGAGATCAACACAGAACAAGCACAGGAAGTTCAATCAGACACAACTGAACTGCCAAAGAATAAAGAAACGTTGGTCTATTGTGTAATACACCCTGACCACAAAGACACCGTTGTTTTGGCGTTTCAGCCTATTGCCAAATGTCTTGCATTTAGTCCGTTTCTGTTAGACAAAAGTATTTGTAGCATGTCCTTGAAATGTAGCTGTTCAATGGGGATGACTACTGAAATGATGTTAACATGTAACTTTGATTCCATTTTAGTATTAAAGTGTCCCATCTGGACCAAATGGACCTATTAGAAATAAGGGGAACCATATGTTTACACAACATTGCTGATGAGACAAACTGAGAGGTATTTCATTGAGTCAGGATCTGTCCATCTAGATATTATGTTTTACTTCAAAGATGTGGAGGTTTCTACATGGAGAATATAGCACTCTCTATAGAACTTATCAGATACTAGTGGGAAAGAGAGGCTAACCTTAGTTAGCCCTGTGAATGACGTCTCACATTGAGAATCTATGTCTAGTGAGTGGGCGGTGTTTGGGCTACTATAGACACAAAACCTCCAAGCAGTATGTACTTTTAGGAGGAACAACAGTCACTTGCAGTCATTATTTGAATCACAGTGGCGATCATGGGACCACAACACAGGGATGTTTTGTATGCTTTGTTTTCATTTCACTCTCCTTGCTTTTGTTTGTCAGGTTCTCCCCTGTTCCTTCGCTAACTGGGGTATAAAGGATACTGTGTATGAATAAACCAATGAAAATGCAATCTG
>TU1354775
AGCTAATTCTGGTCTCCATTTATTCTGGAGGTATCGTGAGGTACAGTATACTGTCATAATGAGATCATTCTGGAGGTATCGTGAGGTACAGTATACTGTTGTAATGAGATCATTCACCCACATAAAGTGACAGCTAGACATCCTCTTGCTGTGGGCAACATAATGCACTTCCTTTACCGCCTAATATcagccatgtctctgtctctccctctacctcccccctctctctcacacacccacacagggcGGCAAAGGAGCAGAAAACTTTGACAAGTTCTTCACACGCACCCAGCCCATGTTGACCCCTCCAGACCAGCTAGTCATCGCCAACATTGACCAGAGCGACTTCGCTGGTTTCTCCTACATCAACCCACAGTTCATCCACCCTTCCCTCCTTCACAGTGTGGTATGAGGGGATAgatcagggagaggaggaagagagagaaagaggttggtgagagagcaagagaaagagagagagggggagaagagagccatgtggactgggactgggacagcAACCCTCCACATTGACCACCAATCCCCTATTGTCCCTTTGTCAAAGAGACTAATATTATCTTCATGTGTTCTCTGGACTTCAGTCGGCGACATTCTGTAAACAAGCTGTCCGCGAACGATCTCGATTGGAATTTGTCTGATGCGATGGAGGGGGTAAGGGAGGGGTTGGTGTACAGGGGAGTATGTCTATCTGGTGATTGAGCGCAGTAATCATGGATACATTGATTTGAGAAGTAGGCCTGCAGTAAGCGTTGACAGTACAGTAAGCATTGACATGAATTGCACACTGTTACCATGGGGAACCCTTTAACTCTGCAACCTACTGGCCTAACATTCAGGAATGGGTTCCATGTTTTCCACAGTTCCAGAACCTCCTACTTGCTCTAGAACCTAGAGCCAaaccctacagtaccttcctgtccGGAAGTTGTCTGTGggactacatacagtatctcatgATTCCTCAGTGTGTTGCTATGGATAGTAAAAGAGAACTCCCTCCCTATGAAGCATGATGGAACATACCCTCCTGTCCctacctttcctctctctgttgtacctactgtactgtactgccatTTCTAAACAGTCTGCTACACCACATTCTAGATTATATTTATATACCTACAGAGAAGAGAGGTCTATTATCTACTGTTACACGAGTGCCAAAATAGAGGTGAAACAAATAATTTTATTCCAGTACATATCTATATAAACATCTACTATCTACAGCGTCCTTTTCTTACGAAATTCCTATAGTCAACTATGATGTCTTTCCTTGTGGTGAAGCCGTCAACCCTTCTGATGGTGTCAGCACGCTAAACTAAGCTCAACACCATGTTTCTCTGGCAGTTTTATTAATATACTCCAAACCCTTACCGAACGTTTACAAACCGCTATCAAACGTTTACAAAACGTTACTAAAATGTAACCCACCAAGTATAGCTGTGTCTAACCTAGTATGTTGTTAAAGAACAGCTTTTAGGTCCGTATGAACAGTTGACTGATGAAACAATGATGAACTTTTAAAGATGGTGTCCAATTTTATTTTGGGTGAAAGCACCGGTACCAATTTTCTCAGAGTTATTTAGGAGAATTTATGAGCAAGACTGAATTGAGGATATGGTTCTGTTCATAAGGTTTGCAACAACATGTAACTTGGTATTCCGGACTTCTATTTATGGGGAAAAATCTTGAACTGAGGTTCATGAGAAGACGATGTTTTGATTTTCCTACTGAAAATGCTCTTTCCATATGCACAATGCAGTTCTCGGTTGCATGCTTATTTCCTGATTCTGAAAAAGCGCTAGATGACTTTCTAGGGGCTGCAGCACACGTCTGATATTTATCATTGTGAAACCAAGTATTATGATATCTGTTGATTCATTCATTGTTGTCTGTATGAAAGTCCTACCCCACTGAAAAGCTGAATGAGATTCAGAGACTTGTTACTTATTAAACATATTCCGTATGTTTCCCTCTATACTTTTCTGTCCAGAGAGAACATTGTTTACCCTATTTGTCGACCATTTTGTAGATATCGAAAGAGCTTTTTCAAAAAGAGAAATGACTCGCAGATTTTATACCACGAACTGAATGTGCTTTTACTACCTTAGACGGGTTAAACATCTCTGTTTAGATGACTATCCCAAAAACACATGACGTTTGGCTGAATCTTTGGTAGCTTTGTTATCAGCGAAACCTTGTAATATGTATTTTCTCTATTTATCCACAGTTTGTTTTTGACTATTTTAAAGGTAGAGTCAGAGAAATGACCTTTGCACAAAAAGCATCGCGATTGCGAGAAATTGCGATGAGCAAGACTCAAGACTTCACTCTCACAAAGTCACCCACAGTATCTGTACATGGGTTCCCTTCACGCGCTTACAGAGTAGTAGGCACTGGACCAAAACTGACCCGCACTCTCAGTGTGTTGCGGAGATTGACCCACTATGCCGTTTACTTTGTGCATCTTGGTCATATCGCTGACTCTACCTTTAATGTTTCACAGACGATAtgcagtatctacagtatgtgtgaCTGTGGCGCGTGGTCCCTGGTTGAATACACTCCTACTCCTAGCCTTGGCAGAAGTGTGTTTTCTGGCTTTCGCTGTGTGCATGTGAGGGTAAGGCCTGATCTAAGCATGAGAGAAGGCATGATGCATGTTAACACAGATCCCCAGGTGTACAGTATGAAGTTCATGTGTCACCAAGCATCACAGTGAGACACACGCCTGTCCCGCTAGCCCCTCCCACTacacttctctcctctttctgttctcctcttctccattTGTTTATTGGTTTGTCTTAGTGTTCAGTCTCCTGACTCAACCAAGTTCTAAATTCAGTCAGAACTCACATCTAAGCCATGGACACAACGATTTGAATTTTCTGTCTCTTCTGTTTTGGTTGTGGTTATGTAGAAGATCTCTTTCTGTGCCAGACTGTGAACCTACATAATGAGAGATCAACACAGAACAAGCACAGGAAGTTCAATCAGACACAACTGAACTGCCAAAGAATAAAGAAACGTTGGTCTATTGTGTAATACACCCTGACCACAAAGACACCGTTGTTTTGGCGTTTCAGCCTATTGCCAAATGTCTTGCATTTAGTCCGTTTCTGTTAGACAAAAGTATTTGTAGCATGTCCTTGAAATGTAGCTGTTCAATGGGGATGACTACTGAAATGATGTTAACATGTAACTTTGATTCCATTTTAGTATTAAAGTGTCCCATCTGGACCAAATGGACCTATTAGAAATAAGGGGAACCATATGTTTACACAACATTGCTGATGAGACAAACTGAGAGGTATTTCATTGAGTCAGGATCTGTCCATCTAGATATTATGTTTTACTTCAAAGATGTGGAGGTTTCTACATGGAGAATATAGCACTCTCTATAGAACTTATCAGATACTAGTGGGAAAGAGAGGCTAACCTTAGTTAGCCCTGTGAATGACGTCTCACATTGAGAATCTATGTCTAGTGAGTGGGCGGTGTTTGGGCTACTATAGACACAAAACCTCCAAGCAGTATGTACTTTTAGGAGGAACAACAGTCACTTGCAGTCATTATTTGAATCACAGTGGCGATCATGGGACCACAACACAGGGATGTTTTGTATGCTTTGTTTTCATTTCACTCTCCTTGCTTTTGTTTGTCAGGTTCTCCCCTGTTCCTTCGCTAACTGGGGTATAAAGGATACTGTGTATGAATAAACCAATGAAAATGCAA

Function

NR:

description
protein kinase C alpha type-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941514.1 False 5555 mRNA 0.46 17 53806640 54049592
TU1354775 True 3762 TUCP 0.42 2 53806644 53810757

Neighbor

gene id symbol gene type direction distance location
cacng5b LOC106606721 coding downstream 3288 53793576 ~ 53803352 (-)
LOC110486794 LOC108245165 coding downstream 81371 53713123 ~ 53725269 (-)
LOC110486791 LOC106601672 coding downstream 98370 53699239 ~ 53708270 (-)
LOC110486790 LOC106606738 coding downstream 116436 53680096 ~ 53690204 (-)
LOC110515632 LOC106601741 coding downstream 127412 53663502 ~ 53679228 (-)
LOC118938612 NA coding upstream 376671 54426263 ~ 54426404 (-)
LOC110538769 NA coding upstream 376844 54426436 ~ 54427451 (-)
LOC118938329 aqp8 coding upstream 687122 54736714 ~ 54740723 (-)
LOC110486825 LOC106606691 coding upstream 691887 54741479 ~ 54748709 (-)
LOC110485228 LOC106606689 coding upstream 763530 54813122 ~ 54831352 (-)
G1187895 NA non-coding downstream 13775 53792307 ~ 53792865 (-)
G1187893 cyth3 non-coding downstream 20187 53785267 ~ 53786453 (-)
G1187779 NA non-coding downstream 109381 53693228 ~ 53697259 (-)
G1187826 NA non-coding downstream 257324 53549099 ~ 53549316 (-)
G1187823 NA non-coding downstream 259143 53547287 ~ 53547497 (-)
G1188011 NA non-coding upstream 52136 54101728 ~ 54102534 (-)
G1188025 NA non-coding upstream 99460 54149052 ~ 54149438 (-)
G1188033 NA non-coding upstream 118394 54167986 ~ 54168328 (-)
G1188073 NA non-coding upstream 214444 54264036 ~ 54265024 (-)
G1188082 LOC106606676 non-coding upstream 240713 54290305 ~ 54290605 (-)
mosmoa C20H16orf52 other downstream 168827 53607021 ~ 53638313 (-)
G1186670 LOC100194703 other downstream 1146831 52659331 ~ 52659809 (-)
G1186381 NA other downstream 1775980 51924963 ~ 52030660 (-)
G1186216 NA other downstream 1795429 52010690 ~ 52011211 (-)
G1186154 NA other downstream 2316399 51489777 ~ 51490241 (-)
G1188147 NA other upstream 399291 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 415941 54409911 ~ 54470838 (-)
G1188186 LOC106588841 other upstream 549809 54599401 ~ 54600449 (-)
G1187930 NA non-coding upstream 66769 53877526 ~ 53877991 (-)
G1187931 NA non-coding upstream 68101 53878858 ~ 53879075 (-)
G1187950 NA non-coding upstream 126703 53937460 ~ 53938325 (-)
G1187972 NA non-coding upstream 176475 53987232 ~ 53987767 (-)
G1187975 NA non-coding upstream 196621 54007378 ~ 54007651 (-)

Expression


Co-expression Network